| Database | ID | Description |
|---|---|---|
| Coils | Coil | Coil |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| MapolyID | Mapoly0096s0050 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpIDDL6 | transcription factor, IDD-related | Published | |
| MpWIP | WIP zinc-finger protein | Published |
Primary subject: identified via T-DNA mutant vj7 (insertion upstream, ~4x higher transcript), overexpression (proOsACT:MpWIP) and amiRNA knockdown, plus SRDX/VP16 dominant constructs and proMpWIP:YFP-NLS reporter. Overexpression/repression caused ectopic dorsal rhizoids; knockdown gave defective air pores. Concluded MpWIP is necessary for air pore complex morphogenesis.
2 core 12 peripheral
Caution: MBEX data are analyzed based on the v7.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g09500.1 acttcactgc ttcgctttca acagcacacc tcctatctgc tcctctcccc ctccctccct ccctctctct ctctctccct ctctctctat ctctctctct ctctctctct atctccctct ctccccctct cccatccttt cttctccctc cctctctccc tcctgtcctg ttcgctgacc tgcctgtccg agggtcgtct tcctccatat gagtgccaag ctctccctca ctcatttctc cccagaggac ccatcattct ctctctctct ccctccctct ctctctctct cttctcttct cttctcttct cttctcctct cttctctcct tcaccatctg tcatctgagt ctgcaatttg ccgatcgtcg cggagcttga aataaaagag ccgtgcgcct cggtagcaag ctcgctcaga gtcgcatctg cggccgccgg tgcatgccga gagatctagc aggctcatcg caccagcact agcactgtgt attattacta ctactacaag gtctgctcgg atcactgagg ctgctgtcat tcgcaactgt tgcactatta gctggaactc cgacacgagc agcggaggaa agcacgggtc cagagaactg atccgtcaat cgtcttccca tcggcgggga cctcgctcgc tcgctcgctc gctcgcattc ctcagacaag tgtacaggaa ggttatcatt ttagcgcacc aacaccagca gcattggaat tggtgctgct cgagtaattc tcatctccga cgttctccga gaatgtttat acgcagtcga ctcagctgtc atggattggg gtcggcgggt agtcggagct tttgaatagc gatcctctat ctgcatcagc ccccgcatct tccatcgcat cgcatcacat cacatcacgt ccgcctctct ctatatctcg agcagacagc tgcttctcgc ctctcgcgga caggataact cttcggctcc gtgggaaaag tgagagaaga cgagtcagtg attgagtgag agagagagag tggaagggag gaaggaagga aggaagcaat caatcaagga aggaaagaac tgctttgctc agtgcagtgc agtgcagtgg agtggagtcc agtggagtcc agtgcagcgc acttgagagc tcgggggctc gaaagggata gatccacagg agaatgcgag tgcatcgagg gggagtatcc atctaagcgc aaggcaggag gatcaggcat cagagagtcg agcagcggag tgagagggca agtcagcgaa tctggggctc ctcacgaaag cgacagtcga ggtgggctcg cgaggggacg aagaaggggg tctgagcacg atgagctcga ggtaccatgc ccagagtagc accgtggcgg tgccgcgggc tctgagctcc atcacggcgc accctctccc gttctgcgaa tggctaaaac cgcacctggc cccgcccgtg acgcaattgc ccgtggccat cccattcacc accgaggaca atgccggcac gtcattcagc gtgtcggggc cttcgtctgg cgccgattcg cccgcctcgg gcgcttccca ttacaacatg ttcggtggcg ctcaccacca attcttccaa actgccacca cgcactacaa tcaccaaagg cgatgcccat cgccaggccc ctctcgcacc gcccagcccc tcccgtttct gagtctcagc cccccgacca acaacaacaa caacaacacc agcggcggca gcagcagcaa caaccaccat caccagcacc acaacagcca caacagccac ggctcgtcgg gggcggcggc ggcgtcgacg acgacggcca gcaaatacca gcagagccag aaccagaatc acaatcacaa tcacaatcac aatcaggaag aggtgccgct gcgcaccgcc atcctgctgc ccagcgcttc gtcgtccggg cccgtggacg acgagccgga cgagaatgtg acggtggcgc tgcacatcgg cccgcccacc tcgtccgact gctcgctcat gagcagcctg cgcagctccg tggtcgaggg catgatgggc aacctgaact acgagagccc catgggcggc ctcgacaagg accgcttcaa ccgagctcgc ggccgcctgc ccgacggcca gtactggatt cccacccccg ctcagatcct cgtcggcccc acgcagttct cgtgccccgt ttgcagcaag accttcaacc gctacaacaa catgcaggta ctgcctccat ctctctctct ctctctctct ctctctctct ctcttcgctt ctctctctct ctttgtcagg cttttctcgt tcattattct ttctttcatc catgcttctt tcttctcgtc tcagtgtccg acatgggctc ggatcattct atgcaaaggc tcacgaactc gaaattagca cgtactcatc gtggacatga atctgtcgac ccgaccgcag cttagctagc tgcgtggcgg cgagagtcca cggtcagaaa atctgggctg aattccgaat ctgaggaaac atcagaggct cggcccatcg cgctcatcat cagatgagat gagtcgagat gatgctcctc gtggggctca tggggcctga gcagcagcag cagcagcagc tggctgttgg tctgtccgtg tgtctgagcg taattatcag aatcgtgtcg attgtttgtg tgagagatgg aggcaattgt gtgggatgag tgaggggtgg gactgacgat ggcgattcgt ggtgggcacg gcagatgcac atgtgggggc acgggtcgca atacaggaaa gggccggagt cgctgcgggg cacgcagccg acggcaatgc tgcggctgcc gtgctactgc tgcgcgcaag ggtgccggaa caacatcgac cacccgcgcg ccaagccgct caaggatttc cgcacgctgc agacgcacta caagcggaag cacgggcaga agccgttcat gtgccgcaaa tgcaacaagg ccttcgccgt gcgcggcgac tggcggacgc acgagaagaa ttgcggcaag ctgtggtact gcatatgcgg gtcggatttc aagcacaagc gctcgctcaa ggatcacatc cgcgccttcg gcaatgggca cgcgccgcat ggcgtcgact cgtgcgagga cgaggaggag aacgcgtcgg aggacgatgc ggacgaggac atgtcggccg gatcgcaatg acgagagtgc cctgggagcc agtgaatttc ttcgccatcc acatccattt catccgccct cgcaataaga cttgctttgt aacaagccct ctcttatctt tgtatcccct acacacattt aagagtggtt tgctactcag cagcaatgta ccttgcaaag attagatcgg atcgtagacg taaaactcag tgcgtggggc taatgagaaa tgctctctcc atgatcagcc cgcccagccc actcgagaca ttcttgtagt cttagccttt taaaagaagt actgctgagg tcgagtgacc tttgatcgaa cacacacctt cgacttcaga tgggcatcaa gtcatcgccc tgaccaacta tccagccagc caccaaccaa ccgacgagcc atccagtcag tcagtcagtc aatcagtctg ccagcccggt tagcctctcc agcaacaaca gcagcaacaa caacaacaac gacaacaaca gcattcacac ttttacactt ttacccgatc aagcgtttag acagaccatg acagcagcag cagctcagac tatccttcga cctcgcattc tcgaccttgc tcaacccttc ataccttcaa tacggcattt tcttgtaagt agaacactct tttgaagggc tttacagatc agggagaagc aattgagaag aacagattag acccacctgt gaaaaccccc ttatagggct cttgtgttta cagtcacatt cttttcatta gacctaatgc agatctgcag ttttcaaggc aagaatcgag ttgaaggctg tacctataag caacatgtaa atgagtcatt tgggtatctt cacttattac tctcgag |
mRNA UTR + CDS |
| >Mp1g09500.1 acttcactgc ttcgctttca acagcacacc tcctatctgc tcctctcccc ctccctccct ccctctctct ctctctccct ctctctctat ctctctctct ctctctctct atctccctct ctccccctct cccatccttt cttctccctc cctctctccc tcctgtcctg ttcgctgacc tgcctgtccg agggtcgtct tcctccatat gagtgccaag ctctccctca ctcatttctc cccagaggac ccatcattct ctctctctct ccctccctct ctctctctct cttctcttct cttctcttct cttctcctct cttctctcct tcaccatctg tcatctgagt ctgcaatttg ccgatcgtcg cggagcttga aataaaagag ccgtgcgcct cggtagcaag ctcgctcaga gtcgcatctg cggccgccgg tgcatgccga gagatctagc aggctcatcg caccagcact agcactgtgt attattacta ctactacaag gtctgctcgg atcactgagg ctgctgtcat tcgcaactgt tgcactatta gctggaactc cgacacgagc agcggaggaa agcacgggtc cagagaactg atccgtcaat cgtcttccca tcggcgggga cctcgctcgc tcgctcgctc gctcgcattc ctcagacaag tgtacaggaa ggttatcatt ttagcgcacc aacaccagca gcattggaat tggtgctgct cgagtaattc tcatctccga cgttctccga gaatgtttat acgcagtcga ctcagctgtc atggattggg gtcggcgggt agtcggagct tttgaatagc gatcctctat ctgcatcagc ccccgcatct tccatcgcat cgcatcacat cacatcacgt ccgcctctct ctatatctcg agcagacagc tgcttctcgc ctctcgcgga caggataact cttcggctcc gtgggaaaag tgagagaaga cgagtcagtg attgagtgag agagagagag tggaagggag gaaggaagga aggaagcaat caatcaagga aggaaagaac tgctttgctc agtgcagtgc agtgcagtgg agtggagtcc agtggagtcc agtgcagcgc acttgagagc tcgggggctc gaaagggata gatccacagg agaatgcgag tgcatcgagg gggagtatcc atctaagcgc aaggcaggag gatcaggcat cagagagtcg agcagcggag tgagagggca agtcagcgaa tctggggctc ctcacgaaag cgacagtcga ggtgggctcg cgaggggacg aagaaggggg tctgagcacg atgagctcga ggtaccatgc ccagagtagc accgtggcgg tgccgcgggc tctgagctcc atcacggcgc accctctccc gttctgcgaa tggctaaaac cgcacctggc cccgcccgtg acgcaattgc ccgtggccat cccattcacc accgaggaca atgccggcac gtcattcagc gtgtcggggc cttcgtctgg cgccgattcg cccgcctcgg gcgcttccca ttacaacatg ttcggtggcg ctcaccacca attcttccaa actgccacca cgcactacaa tcaccaaagg cgatgcccat cgccaggccc ctctcgcacc gcccagcccc tcccgtttct gagtctcagc cccccgacca acaacaacaa caacaacacc agcggcggca gcagcagcaa caaccaccat caccagcacc acaacagcca caacagccac ggctcgtcgg gggcggcggc ggcgtcgacg acgacggcca gcaaatacca gcagagccag aaccagaatc acaatcacaa tcacaatcac aatcaggaag aggtgccgct gcgcaccgcc atcctgctgc ccagcgcttc gtcgtccggg cccgtggacg acgagccgga cgagaatgtg acggtggcgc tgcacatcgg cccgcccacc tcgtccgact gctcgctcat gagcagcctg cgcagctccg tggtcgaggg catgatgggc aacctgaact acgagagccc catgggcggc ctcgacaagg accgcttcaa ccgagctcgc ggccgcctgc ccgacggcca gtactggatt cccacccccg ctcagatcct cgtcggcccc acgcagttct cgtgccccgt ttgcagcaag accttcaacc gctacaacaa catgcagatg cacatgtggg ggcacgggtc gcaatacagg aaagggccgg agtcgctgcg gggcacgcag ccgacggcaa tgctgcggct gccgtgctac tgctgcgcgc aagggtgccg gaacaacatc gaccacccgc gcgccaagcc gctcaaggat ttccgcacgc tgcagacgca ctacaagcgg aagcacgggc agaagccgtt catgtgccgc aaatgcaaca aggccttcgc cgtgcgcggc gactggcgga cgcacgagaa gaattgcggc aagctgtggt actgcatatg cgggtcggat ttcaagcaca agcgctcgct caaggatcac atccgcgcct tcggcaatgg gcacgcgccg catggcgtcg actcgtgcga ggacgaggag gagaacgcgt cggaggacga tgcggacgag gacatgtcgg ccggatcgca atgacgagag tgccctggga gccagtgaat ttcttcgcca tccacatcca tttcatccgc cctcgcaata agacttgctt tgtaacaagc cctctcttat ctttgtatcc cctacacaca tttaagagtg gtttgctact cagcagcaat gtaccttgca aagattagat cggatcgtag acgtaaaact cagtgcgtgg ggctaatgag aaatgctctc tccatgatca gcccgcccag cccactcgag acattcttgt agtcttagcc ttttaaaaga agtactgctg aggtcgagtg acctttgatc gaacacacac cttcgacttc agatgggcat caagtcatcg ccctgaccaa ctatccagcc agccaccaac caaccgacga gccatccagt cagtcagtca gtcaatcagt ctgccagccc ggttagcctc tccagcaaca acagcagcaa caacaacaac aacgacaaca acagcattca cacttttaca cttttacccg atcaagcgtt tagacagacc atgacagcag cagcagctca gactatcctt cgacctcgca ttctcgacct tgctcaaccc ttcatacctt caatacggca ttttcttgta agtagaacac tcttttgaag ggctttacag atcagggaga agcaattgag aagaacagat tagacccacc tgtgaaaacc cccttatagg gctcttgtgt ttacagtcac attcttttca ttagacctaa tgcagatctg cagttttcaa ggcaagaatc gagttgaagg ctgtacctat aagcaacatg taaatgagtc atttgggtat cttcacttat tactctcgag |
CDS |
| >Mp1g09500.1 atggctaaaa ccgcacctgg ccccgcccgt gacgcaattg cccgtggcca tcccattcac caccgaggac aatgccggca cgtcattcag cgtgtcgggg ccttcgtctg gcgccgattc gcccgcctcg ggcgcttccc attacaacat gttcggtggc gctcaccacc aattcttcca aactgccacc acgcactaca atcaccaaag gcgatgccca tcgccaggcc cctctcgcac cgcccagccc ctcccgtttc tgagtctcag ccccccgacc aacaacaaca acaacaacac cagcggcggc agcagcagca acaaccacca tcaccagcac cacaacagcc acaacagcca cggctcgtcg ggggcggcgg cggcgtcgac gacgacggcc agcaaatacc agcagagcca gaaccagaat cacaatcaca atcacaatca caatcaggaa gaggtgccgc tgcgcaccgc catcctgctg cccagcgctt cgtcgtccgg gcccgtggac gacgagccgg acgagaatgt gacggtggcg ctgcacatcg gcccgcccac ctcgtccgac tgctcgctca tgagcagcct gcgcagctcc gtggtcgagg gcatgatggg caacctgaac tacgagagcc ccatgggcgg cctcgacaag gaccgcttca accgagctcg cggccgcctg cccgacggcc agtactggat tcccaccccc gctcagatcc tcgtcggccc cacgcagttc tcgtgccccg tttgcagcaa gaccttcaac cgctacaaca acatgcagat gcacatgtgg gggcacgggt cgcaatacag gaaagggccg gagtcgctgc ggggcacgca gccgacggca atgctgcggc tgccgtgcta ctgctgcgcg caagggtgcc ggaacaacat cgaccacccg cgcgccaagc cgctcaagga tttccgcacg ctgcagacgc actacaagcg gaagcacggg cagaagccgt tcatgtgccg caaatgcaac aaggccttcg ccgtgcgcgg cgactggcgg acgcacgaga agaattgcgg caagctgtgg tactgcatat gcgggtcgga tttcaagcac aagcgctcgc tcaaggatca catccgcgcc ttcggcaatg ggcacgcgcc gcatggcgtc gactcgtgcg aggacgagga ggagaacgcg tcggaggacg atgcggacga ggacatgtcg gccggatcgc aatgacgaga gtgccctggg agccagtgaa tttcttcgcc atccacatcc atttcatccg ccctcgcaat aagacttgct ttgtaacaag ccctctctta tctttgtatc ccctacacac atttaagagt ggtttgctac tcagcagcaa tgtaccttgc aaagattag |
Protein |
| >Mp1g09500.1 MAKTAPGPAR DAIARGHPIH HRGQCRHVIQ RVGAFVWRRF ARLGRFPLQH VRWRSPPILP NCHHALQSPK AMPIARPLSH RPAPPVSESQ PPDQQQQQQH QRRQQQQQPP SPAPQQPQQP RLVGGGGGVD DDGQQIPAEP EPESQSQSQS QSGRGAAAHR HPAAQRFVVR ARGRRAGREC DGGAAHRPAH LVRLLAHEQP AQLRGRGHDG QPELREPHGR PRQGPLQPSS RPPARRPVLD SHPRSDPRRP HAVLVPRLQQ DLQPLQQHAD AHVGARVAIQ ERAGVAAGHA ADGNAAAAVL LLRARVPEQH RPPARQAAQG FPHAADALQA EARAEAVHVP QMQQGLRRAR RLADAREELR QAVVLHMRVG FQAQALAQGS HPRLRQWARA AWRRLVRGRG GERVGGRCGR GHVGRIAMTR VPWEPVNFFA IHIHFIRPRN KTCFVTSPLL SLYPLHTFKS GLLLSSNVPC KD |