Zhou C, Yang T, Cai M, Cui H, Yu F, Liu H, Fu J. · 2025 · BMC Genomics research
doi:10.1186/s12864-025-11609-7 PMID:40301722 PMC12039213
| Gene ID | Name | Evidence / Role | Function (this paper) |
|---|---|---|---|
| Mp2g24110 | MpC2H2-10 | experimental subject | MpIDD family member whose expression is markedly elevated by MeJA and cytokinin treatments; the authors suggest it may promote flowering-related processes. |
| Mp8g06180 | MpIDDL1 | experimental subject | One of seven MpIDD family members identified and characterized. Expression analysis showed MpIDD1 is most abundant in the meristem and is downregulated by ABA; it interacts with MpGRAS3/MpSCR in yeast two-hybrid assays. |
| Mp1g15660 | MpIDDL2 | experimental subject | MpIDD family member whose expression is specific to gemma cups and strongly induced by IAA (auxin) treatment; interacts with MpGRAS3/MpSCR, suggesting a role in gemma cup development. |
| Mp5g20530 | MpIDDL3 | experimental subject | MpIDD family member that retains the conserved SHR-binding motif and was the strongest interactor of MpGRAS8/MpSHR in yeast two-hybrid assays, implicating it in a conserved SHR/IDD module. |
| Mp7g07550 | MpIDDL4 | experimental subject | MpIDD family member analyzed for phylogeny, structure, expression and interactions; interacted only weakly with MpGRAS8/MpSHR in this study. |
| Mp8g12510 | MpSTOP2 | experimental subject | MpIDD family member showing very high expression in rhizoids; interacted only weakly with MpGRAS8/MpSHR in yeast two-hybrid assays. |
| Mp1g09500 | MpWIP | experimental subject | MpIDD family member (also named MpWIP) belonging to branch VI; highly expressed in gemmae and meristem, with its promoter previously reported active in developing air pores. |
| Mp1g10440 | MpGRAS3 | experimental comparator | M. polymorpha SCR ortholog (MpGRAS3/MpSCR) used in interaction assays; confirmed interactions with MpIDD1 and MpIDD2. |
| Mp1g22880 | MpGRAS8 | experimental comparator | M. polymorpha SHR ortholog (MpGRAS8/MpSHR) used in yeast two-hybrid interaction assays; interacted strongly with MpIDD3. |
| — | MpSCR missing | sequence comparator | SCR-ortholog designation for MpGRAS3 based on closest homology to Arabidopsis AtSCR. |
| — | MpSHR missing | sequence comparator | SHR-ortholog designation for MpGRAS8 based on homology to Arabidopsis AtSHR. |
| Mp3g23400 | MpEF1 | experimental tool | Used as the internal reference gene for qRT-PCR normalization. |