Mp1g24140



Description

Annotation

Database ID Description
KEGG K09338 HD-ZIP; homeobox-leucine zipper protein
KOG KOG0483 Transcription factor HEX, contains HOX and HALZ domains; [K]
SUPERFAMILY SSF46689 Homeodomain-like
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF55961 Bet v1-like
Gene3D G3DSA:3.30.530.20 -
CDD cd00086 homeodomain
CDD cd08875 START_ArGLABRA2_like
Pfam PF08670 MEKHLA domain
ProSiteProfiles PS50071 'Homeobox' domain profile.
Pfam PF01852 START domain
PANTHER PTHR45950:SF7 HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14
Gene3D G3DSA:1.10.10.60 -
SMART SM00234 START_1
Pfam PF00046 Homeodomain
ProSiteProfiles PS50848 START domain profile.
SMART SM00389 HOX_1
PANTHER PTHR45950 HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14
GO GO:0008289 lipid binding
GO GO:0003677 DNA binding
MapolyID Mapoly0061s0107 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3HDZ transcription factor, HD, homeodomain protein Published
MpHD12 transcription factor, HD, homeodomain protein Published

Associated Literature (AI-based literature mining, Beta-version)

The single Marchantia C3HDZ ortholog (Mp1g24140); MpC3HDZ-VENUS reporter showed dorsally polarized expression increasing at the plate-to-disc transition. Three CRISPR loss-of-function mutants developed radialized, stalk-like thalli lacking gemma cups and air pores. C3HDZ is required for dorsoventrality but not for meristem initiation.

2 core 3 peripheral

Solé-Gil A, Sakai Y, Catarino B, Jones VAS, Youngstrom CE, Jordà-Segura J, Cheng CL, Dolan L, Ambrose BA, Ishizaki K, Blázquez MA, Agustí J. (2025) · Developmental cell  research experimental subject
Class III HD-Zip; spatial expression profile complementary to MpACL5 and MpSACL, part of the thermospermine-linked regulatory module studied here.
Wallner, E.-S., et al. (2024) · Current Biology  research experimental subject
The single Marchantia C3HDZ ortholog (Mp1g24140); MpC3HDZ-VENUS reporter showed dorsally polarized expression increasing at the plate-to-disc transition. Three CRISPR loss-of-function mutants developed radialized, stalk-like thalli lacking gemma cups and air pores. C3HDZ is required for dorsoventrality but not for meristem initiation.
Duckett, J. G. (2024) · Current Biology  research citation background
Dispatch/commentary: cites the class III HD-Zip TF MpC3HDZ marking the dorsal side of young sporelings/meristem.
Aggarwal, B., et al. (2024) · RNA Biology  research citation background
Cited from prior work as the MpmiR166 target (HD-ZIPIII TF) with established developmental roles.
Pietrykowska, H., et al. (2022) · Journal of Experimental Botany  review citation background
miRNA pathway gene (Pietrykowska 2022)

Transcript models

Transcript ID Location Sequences Extract region
Mp1g24140.1 chr1:24841048..24852860 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g24140.2 chr1:24840998..24848268 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1 genome.

Link to the original image in MBEX


Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.