Mp1g24140



Description

Annotation

Database ID Description
KEGG K09338 HD-ZIP; homeobox-leucine zipper protein
KOG KOG0483 Transcription factor HEX, contains HOX and HALZ domains; [K]
SUPERFAMILY SSF46689 Homeodomain-like
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF55961 Bet v1-like
Gene3D G3DSA:3.30.530.20 -
CDD cd00086 homeodomain
CDD cd08875 START_ArGLABRA2_like
Pfam PF08670 MEKHLA domain
ProSiteProfiles PS50071 'Homeobox' domain profile.
Pfam PF01852 START domain
PANTHER PTHR45950:SF7 HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14
Gene3D G3DSA:1.10.10.60 -
SMART SM00234 START_1
Pfam PF00046 Homeodomain
ProSiteProfiles PS50848 START domain profile.
SMART SM00389 HOX_1
PANTHER PTHR45950 HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14
GO GO:0008289 lipid binding
GO GO:0003677 DNA binding
MapolyID Mapoly0061s0107 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3HDZ transcription factor, HD, homeodomain protein Published
MpHD12 transcription factor, HD, homeodomain protein Published

Transcript models

Transcript ID Location Sequences Extract region
Mp1g24140.1 chr1:24841048..24852860 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g24140.2 chr1:24840998..24848268 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.