Mp2g22250



Description

Annotation

Database ID Description
KEGG K09287 RAV; RAV-like factor
CDD cd10017 B3_DNA
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR31140:SF1 AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR TEM1
ProSiteProfiles PS51032 AP2/ERF domain profile.
CDD cd00018 AP2
PANTHER PTHR31140 B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3
Pfam PF00847 AP2 domain
Pfam PF02362 B3 DNA binding domain
Gene3D G3DSA:3.30.730.10 -
Gene3D G3DSA:3.10.20.90 -
SUPERFAMILY SSF101936 DNA-binding pseudobarrel domain
ProSiteProfiles PS50863 B3 DNA-binding domain profile.
SUPERFAMILY SSF54171 DNA-binding domain
SMART SM00380 rav1_2
SMART SM01019 B3_2
Gene3D G3DSA:2.40.330.10 -
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0003677 DNA binding
GO GO:0006355 regulation of transcription, DNA-templated
MapolyID Mapoly0072s0102 -

Nomenclature

Gene symbol Product Transcript ID Status
MpAP2B3-1 transcription factor, AP2-B3 Published
MpRAV transcription factor, AP2-B3 Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp2g22250.1 chr2:24382930..24388469 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.