Mp3g13250



Description

Annotation

Database ID Description
KOG KOG4232 Delta 6-fatty acid desaturase/delta-8 sphingolipid desaturase; [I]
PIRSF PIRSF015921 FA_sphingolip_des
SUPERFAMILY SSF55856 Cytochrome b5-like heme/steroid binding domain
SMART SM01117 Cyt_b5_2
ProSiteProfiles PS50255 Cytochrome b5 family, heme-binding domain profile.
Gene3D G3DSA:3.10.120.10 Flavocytochrome B2
PANTHER PTHR19353 FATTY ACID DESATURASE 2
Pfam PF00173 Cytochrome b5-like Heme/Steroid binding domain
CDD cd03506 Delta6-FADS-like
PANTHER PTHR19353:SF14 DELTA(5) FATTY ACID DESATURASE C-RELATED
Pfam PF00487 Fatty acid desaturase
GO GO:0006629 lipid metabolic process
GO GO:0016021 integral component of membrane
GO GO:0016491 oxidoreductase activity
MapolyID Mapoly0050s0117 -

Nomenclature

Gene symbol Product Transcript ID Status
MpDES5 Delta5 fatty acid desaturase Published
MpFAD7 Secondary metabolism enzyme Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Associated Literature (AI-based literature mining)

Delta5 fatty acid desaturase; MpDES5 mediates two Delta5-desaturation reactions, dihomo-gamma-linolenic acid (DGLA; 20:3Delta8,11,14) to arachidonic acid (AA;20:4Delta5,8,11,14) in the n-6 pathway, and eicosatetraenoic acid (ETA; 18:4Delta8,11,14,17) to eicosapentaenoic acid (EPA; 20:5Delta5,8,11,14,17) in the n-3 pathway. (from nomenclature)

2 core 2 peripheral

Kneeshaw, S., et al. (2022) · PNAS  research experimental subject
Desaturase converting eicosatetraenoic acid (ETA) into EPA. Mpdes5 mutants were analyzed for EPA/ETA production and downstream jasmonate biosynthesis.
Kajikawa M, Yamato KT, Kohzu Y, Nojiri M, Sakuradani E, Shimizu S, Sakai Y, Fukuzawa H, Ohyama K. (2004) · Plant Mol Biol  research experimental subject
Delta-5-desaturase cDNA isolated and characterized; together with MpDES6 and MpELO1 reconstituted arachidonic/eicosapentaenoic acid synthesis in yeast.
Resemann, H. C., et al. (2021) · Nature Plants  research sequence comparator
Delta-5 sphingolipid desaturase of M. polymorpha; used as a reference sequence in a phylogenetic study of sphingolipid-desaturase convergence across land plants.
Galassi L, Medina-Paz F, Jimenez-Aleman GH. (2026) · Plants (Basel)  review citation background
Bryophyte-specific ER Delta5-desaturase; Mpdes5 is depleted in EPA and lacks C20-OPDA but retains Delta4-dn-iso-OPDA.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g13250.1 chr3:13021083..13026108 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1r2 genome.

Link to the original image in MBEX


Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.