Mp3g25460



Description

Annotation

Database ID Description
KOG KOG0264 Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1; N-term missing; [B]
KOG KOG1033 eIF-2alpha kinase PEK/EIF2AK3; N-term missing; [J]
Gene3D G3DSA:2.130.10.10 -
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
ProSiteProfiles PS50294 Trp-Asp (WD) repeats circular profile.
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile.
Coils Coil Coil
SUPERFAMILY SSF50978 WD40 repeat-like
Pfam PF00400 WD domain, G-beta repeat
PRINTS PR00320 G protein beta WD-40 repeat signature
ProSitePatterns PS00678 Trp-Asp (WD) repeats signature.
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
SMART SM00320 WD40_4
ProSiteProfiles PS50011 Protein kinase domain profile.
PANTHER PTHR44218 PROTEIN SPA1-RELATED 2
GO GO:0004672 protein kinase activity
GO GO:0006468 protein phosphorylation
GO GO:0009640 photomorphogenesis
GO GO:0005524 ATP binding
GO GO:0005515 protein binding
MapolyID Mapoly0100s0059 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSPA1 A signaling protein of multiple light signaling Published

Transcript models

Transcript ID Location Sequences Extract region
Mp3g25460.1 chr3:27005442..27011643 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g25460.2 chr3:27005442..27011622 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g25460.3 chr3:27005442..27011622 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.