Mp4g02060



Description

Annotation

Database ID Description
KOG KOG4299 PHD Zn-finger protein; C-term missing; [R]
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00046 Homeodomain
CDD cd15504 PHD_PRHA_like
CDD cd00086 homeodomain
Pfam PF00628 PHD-finger
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain
SMART SM00389 HOX_1
SMART SM00249 PHD_3
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
PANTHER PTHR12628 POLYCOMB-LIKE TRANSCRIPTION FACTOR
ProSiteProfiles PS50071 'Homeobox' domain profile.
Gene3D G3DSA:1.10.10.60 -
ProSitePatterns PS01359 Zinc finger PHD-type signature.
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
SUPERFAMILY SSF46689 Homeodomain-like
GO GO:0003677 DNA binding
MapolyID Mapoly0080s0093 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHD15 transcription factor, HD, homeodomain protein Published
MpPHD transcription factor, HD, homeodomain protein Published

Transcript models

Transcript ID Location Sequences Extract region
Mp4g02060.1 chr4:2421212..2441842 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.2 chr4:2421212..2441842 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.3 chr4:2421212..2441842 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.4 chr4:2421212..2439153 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.5 chr4:2421212..2439153 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.6 chr4:2421212..2439153 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.7 chr4:2421212..2439153 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.