Mp4g20600



Description

Annotation

Database ID Description
KOG KOG1601 GATA-4/5/6 transcription factors; C-term missing; [K]
CDD cd17584 REC_typeB_ARR-like
Pfam PF00249 Myb-like DNA-binding domain
Gene3D G3DSA:1.10.10.60 -
SMART SM00448 REC_2
Pfam PF00072 Response regulator receiver domain
ProSiteProfiles PS50110 Response regulatory domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR43874:SF7 TWO-COMPONENT RESPONSE REGULATOR
Gene3D G3DSA:3.40.50.2300 -
SUPERFAMILY SSF46689 Homeodomain-like
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
PANTHER PTHR43874 TWO-COMPONENT RESPONSE REGULATOR
SUPERFAMILY SSF52172 CheY-like
TIGRFAM TIGR01557 myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class
GO GO:0000160 phosphorelay signal transduction system
GO GO:0003677 DNA binding
MapolyID Mapoly0101s0006 -

Nomenclature

Gene symbol Product Transcript ID Status
MpRRB cytokinin response regulator, type-B; transcription factor, GARP Published

Transcript models

Transcript ID Location Sequences Extract region
Mp4g20600.1 chr4:23364241..23368032 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g20600.2 chr4:23364241..23368592 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.