Mp5g09130



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
ProSitePatterns PS00344 GATA-type zinc finger domain.
ProSiteProfiles PS50114 GATA-type zinc finger domain profile.
PANTHER PTHR46855 OSJNBB0038F03.10 PROTEIN
Gene3D G3DSA:3.30.50.10 -
Pfam PF13919 Asx homology domain
CDD cd00202 ZnF_GATA
SUPERFAMILY SSF57716 Glucocorticoid receptor-like (DNA-binding domain)
PANTHER PTHR46855:SF14 GATA TRANSCRIPTION FACTOR 26
Pfam PF00320 GATA zinc finger
SMART SM00401 GATA_3
GO GO:0043565 sequence-specific DNA binding
GO GO:0008270 zinc ion binding
GO GO:0006355 regulation of transcription, DNA-templated
MapolyID Mapoly0095s0046 -

Nomenclature

Gene symbol Product Transcript ID Status
MpGATA5 transcription factor, GATA Published

Transcript models

Transcript ID Location Sequences Extract region
Mp5g09130.1 chr5:9884001..9892103 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g09130.2 chr5:9884001..9892100 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.