Mp8g14640



Description

Annotation

Database ID Description
CDD cd11378 DUF296
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00384 AT_hook_2
SUPERFAMILY SSF117856 AF0104/ALDC/Ptd012-like
PANTHER PTHR31500:SF9 AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9
Pfam PF03479 Plants and Prokaryotes Conserved (PCC) domain
Gene3D G3DSA:3.30.1330.80 Hypothetical protein
ProSiteProfiles PS51742 PPC domain profile profile.
PANTHER PTHR31500 AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9
PRINTS PR00929 AT-hook-like domain signature
GO GO:0003680 minor groove of adenine-thymine-rich DNA binding
GO GO:0003677 DNA binding
MapolyID Mapoly0151s0042 -

Nomenclature

Gene symbol Product Transcript ID Status
MpATHOOK3 transcription factor, AThook Published

Transcript models

Transcript ID Location Sequences Extract region
Mp8g14640.1 chr8:16401300..16407091 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g14640.2 chr8:16401300..16407044 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.