| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF00098 | Zinc knuckle |
| SMART | SM00343 | c2hcfinal6 |
| Coils | Coil | Coil |
| PANTHER | PTHR23002 | ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. |
| Pfam | PF06273 | Plant specific eukaryotic initiation factor 4B |
| Gene3D | G3DSA:4.10.60.10 | - |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains |
| KOG | KOG4400 | E3 ubiquitin ligase interacting with arginine methyltransferase; N-term missing; C-term missing; [O] |
| KOG | KOG0996 | Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C); N-term missing; C-term missing; [BD] |
| MapolyID | Mapoly0029s0022 | - |
| GO | GO:0003727 | single-stranded RNA binding |
| GO | GO:0008270 | zinc ion binding |
| GO | GO:0045182 | translation regulator activity |
| GO | GO:2000767 | positive regulation of cytoplasmic translation |
| GO | GO:0003743 | translation initiation factor activity |
| GO | GO:0003729 | mRNA binding |
| GO | GO:0005737 | cytoplasm |
| GO | GO:0003676 | nucleic acid binding |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpC2H2-6 | transcription factor, C2H2-ZnF | Published |
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g02250.1 GCAGAGGAAA ACGCTCCGCG GGCTAACCGC CAAGCTGCCA CTAATCGCAA TCACGACCGG CTCCGACGAA GGAAGGAGCC GTGCATTAGA GCTCCGCGAT TAGGGTAACC CGGTGCCGGG CGTCGCGCTG TTGCGTGCAC GCAGAGCGGG TACCGGCCCG GCCCGGCCCG TGGCGACGAG GGCGGAGGAG GGTCGAGGCA GGCAGGCGGG CGGGCGGGCG GGTCCGAGGG AGCAGCTGCC GCTGAAGGCG AGGCGAGGCC GCGAGACCTG ACCAGAGGAG ACCAGCCACA GCGCACCTCC CTTCCTTCTT CCTTCTTTGA ACAACAAGAG TGCCGGAGCG CAGCCGTGAG TCGATTTCTT TTACATATTG CGCGCTTTAC TACGCTGCCG CGGCGTTGAG CAATCCTTCC ATTGTTCAGT CAGGTGAGCA GCACGCCTTG CGTTTCGAGG GAAAGCATGG CATGAAATGG AATGGAATGG AATGGGCTGG GATGGTTGGG GTGGGGGTGG CAAAGAAGAG CTCGGGACGG GCGGGGAAAA AGATGGAGGG AAGGAGGATC TGGTTAATTC GAGTTTCGGG GCTATTTTTT TCTTCTTCTC GGGGCTCGCA TGCTTCCGGG TGTTGCTCGA TAGGCTGAGC ACGACCGAGT ATGAACATGC TTGGGCAGTA GGGGAAATCT CCATATCTTA GCGTAGCCAG CGTCAACGGT TGGGTCCTGA TTTGAGAATT GTGGAATCTT GTAGCGTCCG CGGCTGATTG ATTGATTGAT TGACAGTGAC ATTCCGGTCA GCAGTTGGCG GTATCGGTTG TTCTTGTTGT TGCTTCTGTT TCTTTTTCCC GTTTCGGCCC GTTCACTCTT CTTTCTTCTG CGCGCGGGGT TTCTGATCTA CCCCGTTTTT GTTCTAGGTA GTTGACATTT TTGTTTATTC ATCGTTCGCC ACGAGGCATG TTGTGGCCTC TGTCTTGTCT CAGAGTCATC TCGATGTTGT TGAATGGTAA GGATTGGATT GTTGTGACAG GTTCTCAAGA AGGAACGTGG AAGTGGAGTG ACAATGAGCT ACGCAGAGGA CGAGGGTTCA GGCAGGCCCA AGCTTAGCCT GCAGCCAAGA GGATCTGGAG CCGATCAAGC ACCCTCTACA CCTTCCAAAA CTAGCAAGGC ATAACTACTT TCCGATCTGT ATTCCTAGTT TCGACCATCT TAGGTTTCAC ACTCCAGGTT CTATTTGCGA GATGTAATAC CGTAGAGTGC TTGAATGGTT GTACAGACTT CTGTATCTTT CCACCCGTTT CGATCTGCTG CTCAATACCT GCAGGAAGTA CCGAGAGCTT GGTACATACT GCTCAGATGT CGATGTTAGC TTTATGATCT TTTATGGTGA CGTAGCATGG ATGTCGTCGG TTGCTTTAAT GATATCTTTC TTCCATCAAC GGCATCTTGA CCATCCATCT CAGATGCGAA GGTTATAGTC GGATCCTGAT TGGCATCACA GTTGTACAGG GTTTCATGGC ATAGAACCCT GGCCTACTGG AATGTTGGGG AATAGTACCT GGATGGCGGA GTATGTGACC TGTAGAAATT GAACCCACGT CGAACATCGT GCCTGACTTT ACAATCTGAG CTAACTCTGC GTTATTACTC TTCTGCTTTT GGCCCTTTGC TTAAATGAAT GTTCATCGTT TTCCTGGAAT TTCTGGTTCA ATGCGGGTCA CACAAGCGAT TATTTGGAGA GGAATGACAG TCTTATATCC TGTTTTGTCA AATTTGCAGC CCAACCCTTT TGGTGCGGCA CGACCTCGAG AACAAGTAAT TGCTGAAAGA GAAGGCAAGA AGGAGACTGA AGTTCTGAGA GAGCAAGCAC AAAAGGAATG GAAGCCAAGT GTGAGTACTT TGCTCTGAAT CCATGTTTTG TCGACAGCAA TTTGGGGCAC AAAGCTTTCT GTGGGGAATG ATGTGTTGCA AGGTTAGCAG GGCGACCAGT TTTTACCTCA CAATTTTCAT TGGTAGAAAA GGTTTCTGAT TTGCCAATCC GTGAACGATA GTGTAAATCT CGCCTTTCGT GTCCGGAGAA ATTGGCAGAT TTTGCGAAAT TTCGTTTTCC CTATGGAGAC GATTTTCAGA CAAATGCGGA ATGACTAAGC AGATTGTTCA GTTCATCGTT CATAAAAATA TTGAAGCCTA GGGTTAATTT CAATCTCATC GTACAGAGTA GGTTCGTTTA TCTGAGTCAT TATAAGAGAG GTCAACGGTC GAACTTTCAG GACACCCATG TTCCATTAGT TGGATCGTTC TATCCCTGGC ATTTCTCCTG TTACCATATT TCCACTGAAG AGGAAAGAAC ATTCATCCAG CCGAAGAGCC CATGTTATTT CAGTTCTGAA GTAGTACATT GCAAAGAATG AAACTAATCG CAACAATGGC TTGACGAAGC TTTTCAAGCT ACCGTCTCGT TGAGACATTC ACTTAGCTAT CCTCTCCTTG CTCATGTAAG GAGAAGCTTT CAAAGAACGG GCTGGATGAT CTGGTGATCT CTTTCAGTAT GTGTATGAGT GGCAGTCTGA ATTCTTCTGT GAGGTCCTTC GCTTTTTGGT TGCCAGAGAA TCGCTTCCTA AACCTTTCAA TTCTCTTTTA AATAGAATCA AAAGTAGAAA TTATCTACGC TTGGTCTTGT TCATACTTAT TCTCACAACA AAGCTTTCCG CTGTATGATA TTCCACTGTG GCCCGAGTCG TTTGGTCCTC ATGTTCCTCA TGGTTAAGTC CTGGAGATTG ATCCTTGCGG TTGCGGTTTA TGCAGCATAA ATCTTGTTCA AATTTAAACT CTAGCTTGTC ATTTCGACCA CTATAGTTTT GAAATTGTCA GAGGAAGGAG AACAAACCTG TTCTGACCTA GAATCCTGTG CGTTACTTAT TTGAAATTTT TCTCAAATGT GTGCTCTGCC TTTGTACGCT AGAAGGGCGG AACTATTAGC GCTTAGTGCC TTGCCTTCAA TAACCTAACT TATTGTGTTG AAAATAATTG TAGAACCCAT AGTGTTGATG ATTTCCCTAG CAGTTTGTGG TGGTTTTTAC TTCGGCATGG AGATAGAAAT TTTGTTGTTG GTGTGCAGTA TAACTGACTT GTGATCCATT TGTCTTTTTC CGTCTCAGAT CGTCTTATCA GAGTCTCAAC GAGAAGAGAA AAAAGCGGTT GAAGCAGAGC TTGCGTTTGC AAAAAGTGAA CTCAAGAAGG AAGTCGATCC TGTCAAATCT AAACTTATGA AAGAGGAAGT TGCGAATATG GAGAAAAAGC TTGAGGAGCT TTTGGCATCT TTTGAGGTAC TCCAGCTCTA CTTCATCCTC GTTTAGTGTC AGTAGAGTAA ATTGTGTATA CTTCATCTTG ATTCTTAGTT GTTATCCGGG TGGGGTAAGA TCAACATCCG GATTTTCAAC ACCGTTTGAA ATTGTCGGAC TGCGAATTTC ACGAGACCTA GGCTGTCTGA ATGGAGAGTT TATCGTAGCG CCTGTTAGAT TTGGCCCCTA AAAGGAAGAA CGTGCTCTAC ATGCTCGACT TACAGTTTCC TACACTGTCC AACGCATTGA TTTCGATAGG TAGCACTTTG GTGGGCTGGA CGCCAGGGTT GTGTCATGCT TGCTGTCAAA CATAGGAATG TTGTACTCAA CATGCCACCT TCGTGGCATG TTGAGTAGAA CAAGTGGATC AAGTTGAGTG CTGGAAATGA GAAACTAAGA CCTGTGCCTG TAGTAACGGG TGCCTTGGAA GATAACCGAA TTCAATGATT TGTGTTGGCT GTTCAGCAAA GTATTATAAT ATATCTTCTG GCATGCAGAA AATGGCAGTC CAAACCGCTC AGACCGGTGG TCTAAGACGC CCATACGAAA AGAGGAGAGA CGATGAGCGA TTACCTGCAG CTGCCTTGCC TGTCGGGGGC GGTTATGGCG GGGTTGAAAG TCACGATAGT TATAACAACT TTGGTAGGAG CAAAGATCGT GACTCTGACA GGGTAGGATC TTATGGTGAT ACCTGGAGTG CCAAAGGAGG CGGTGGTGCC GGAGGTGGCA AGGGTGCTGG CTCACAGTGT TTCAGTTGTG GAGAGGTATA AACGTGCTGC TTGGCTCAGA CGTTTGGACG TCGTTTTGCT TGATACTTTT AGTTTGTGAC GTCTTGTCAA AACCTGACCT CTTGCTTGCA TGTTTTTTTA CATACGAGCT TCTGACACGA GTGTTGAGTT TTGGCAGATG GGACACTTTT CGCGGGAATG CCCAAGTGGA GGAGTCGGTG GTGGTAGAGG AGGGTATGGA GGTAACTTTG GAGGCGGAGG TGGCAGGAGT GGATCGCGCG CTTGTTATAC CTGTGGCCAA GAGGGTCACA TCTCTCGGGA ATGTCCGCAG GCCGGAAGTG GAGGATATGG AGCCCGTGGG GGTGGCGGTT ATGGTTCTGC CGGGGGTAGC TATGGCGCGT CATACGGTGG AGGTTATGGT AGCAGTGCCC CAGATTATGA CACTGGAGCA TCTTATGGCC CAGCTAGTCA AGGGGGAGGT GCTTACGCCG CCGGAGGTAC TTATGACGAC CGTGTGTCAT ATGGGGGTAC GGGTGCTCGT GGAAGTGCAG GTGGTTACTC AAGATGGGAA GGTCATTAAC TGCGAGAAGG TTGCTGCGGT ATAATTTCTC GGTCAGACAC ATTTCTGAAC ACCAGCGAAC GATGTACAGT CACTGTGAAT GTCTGTTGAT GAGAGTCGTA CTTATTGGAT AGATACATTT CCCAACTTGG CAGTACCCAC TTTGTGGGTG TTAAAAATGC TCTTCTTTTA GTGTCATTGT CTGAAGAGCC CTAGGTCTAA GGATGGTTAT ATGCATCTCT GCGCAGTCTC GTTTAATGTC TCGCAGAATT GCCTGCAGTT TAGTCGCTTG TATTTTTTGT CTTTTCTTGG AAAGGACAGT GACTCTTAAA CTAATTTTGA AAGAGCAGGT TTTTAGGACG CTTTGCAATC GTCTTTTTTT CTCGAATTTG GAGTATGGTT CAGCTCAAAT GCCCGGTTTA ATGTTTGGTC AACCTTGCGT TTCAAAGCCC AGGTTGGTTG AACATTGCAC GGGATCTGTG AGTCCACTGT GAGTTTTCCA CGCCACTTGT CTGAAGGAGG ACGGTGACGT CAAGTAGTTC ACAATCTAGT TTGTCTTCAG CCGATACTGA ACAATTCGTA GCAGGTTCGG TCTACCAGCA TAGAGGACAG AAATCAGAGA CTCCTGCCTT GAACATTTTG CTGGTCGTTC TCCGAGATAA GCACAGATCG TCGATACATG TAGCCTGTGT AAAGGACCGG CATCTTCAGC TTAATTCGAA TAAACT |
mRNA UTR + CDS |
| >Mp1g02250.1 GCAGAGGAAA ACGCTCCGCG GGCTAACCGC CAAGCTGCCA CTAATCGCAA TCACGACCGG CTCCGACGAA GGAAGGAGCC GTGCATTAGA GCTCCGCGAT TAGGGTAACC CGGTGCCGGG CGTCGCGCTG TTGCGTGCAC GCAGAGCGGG TACCGGCCCG GCCCGGCCCG TGGCGACGAG GGCGGAGGAG GGTCGAGGCA GGCAGGCGGG CGGGCGGGCG GGTCCGAGGG AGCAGCTGCC GCTGAAGGCG AGGCGAGGCC GCGAGACCTG ACCAGAGGAG ACCAGCCACA GCGCACCTCC CTTCCTTCTT CCTTCTTTGA ACAACAAGAG TGCCGGAGCG CAGCCGTGAG TCGATTTCTT TTACATATTG CGCGCTTTAC TACGCTGCCG CGGCGTTGAG CAATCCTTCC ATTGTTCAGT CAGGTTCTCA AGAAGGAACG TGGAAGTGGA GTGACAATGA GCTACGCAGA GGACGAGGGT TCAGGCAGGC CCAAGCTTAG CCTGCAGCCA AGAGGATCTG GAGCCGATCA AGCACCCTCT ACACCTTCCA AAACTAGCAA GCCCAACCCT TTTGGTGCGG CACGACCTCG AGAACAAGTA ATTGCTGAAA GAGAAGGCAA GAAGGAGACT GAAGTTCTGA GAGAGCAAGC ACAAAAGGAA TGGAAGCCAA GTATCGTCTT ATCAGAGTCT CAACGAGAAG AGAAAAAAGC GGTTGAAGCA GAGCTTGCGT TTGCAAAAAG TGAACTCAAG AAGGAAGTCG ATCCTGTCAA ATCTAAACTT ATGAAAGAGG AAGTTGCGAA TATGGAGAAA AAGCTTGAGG AGCTTTTGGC ATCTTTTGAG AAAATGGCAG TCCAAACCGC TCAGACCGGT GGTCTAAGAC GCCCATACGA AAAGAGGAGA GACGATGAGC GATTACCTGC AGCTGCCTTG CCTGTCGGGG GCGGTTATGG CGGGGTTGAA AGTCACGATA GTTATAACAA CTTTGGTAGG AGCAAAGATC GTGACTCTGA CAGGGTAGGA TCTTATGGTG ATACCTGGAG TGCCAAAGGA GGCGGTGGTG CCGGAGGTGG CAAGGGTGCT GGCTCACAGT GTTTCAGTTG TGGAGAGATG GGACACTTTT CGCGGGAATG CCCAAGTGGA GGAGTCGGTG GTGGTAGAGG AGGGTATGGA GGTAACTTTG GAGGCGGAGG TGGCAGGAGT GGATCGCGCG CTTGTTATAC CTGTGGCCAA GAGGGTCACA TCTCTCGGGA ATGTCCGCAG GCCGGAAGTG GAGGATATGG AGCCCGTGGG GGTGGCGGTT ATGGTTCTGC CGGGGGTAGC TATGGCGCGT CATACGGTGG AGGTTATGGT AGCAGTGCCC CAGATTATGA CACTGGAGCA TCTTATGGCC CAGCTAGTCA AGGGGGAGGT GCTTACGCCG CCGGAGGTAC TTATGACGAC CGTGTGTCAT ATGGGGGTAC GGGTGCTCGT GGAAGTGCAG GTGGTTACTC AAGATGGGAA GGTCATTAAC TGCGAGAAGG TTGCTGCGGT ATAATTTCTC GGTCAGACAC ATTTCTGAAC ACCAGCGAAC GATGTACAGT CACTGTGAAT GTCTGTTGAT GAGAGTCGTA CTTATTGGAT AGATACATTT CCCAACTTGG CAGTACCCAC TTTGTGGGTG TTAAAAATGC TCTTCTTTTA GTGTCATTGT CTGAAGAGCC CTAGGTCTAA GGATGGTTAT ATGCATCTCT GCGCAGTCTC GTTTAATGTC TCGCAGAATT GCCTGCAGTT TAGTCGCTTG TATTTTTTGT CTTTTCTTGG AAAGGACAGT GACTCTTAAA CTAATTTTGA AAGAGCAGGT TTTTAGGACG CTTTGCAATC GTCTTTTTTT CTCGAATTTG GAGTATGGTT CAGCTCAAAT GCCCGGTTTA ATGTTTGGTC AACCTTGCGT TTCAAAGCCC AGGTTGGTTG AACATTGCAC GGGATCTGTG AGTCCACTGT GAGTTTTCCA CGCCACTTGT CTGAAGGAGG ACGGTGACGT CAAGTAGTTC ACAATCTAGT TTGTCTTCAG CCGATACTGA ACAATTCGTA GCAGGTTCGG TCTACCAGCA TAGAGGACAG AAATCAGAGA CTCCTGCCTT GAACATTTTG CTGGTCGTTC TCCGAGATAA GCACAGATCG TCGATACATG TAGCCTGTGT AAAGGACCGG CATCTTCAGC TTAATTCGAA TAAACT |
CDS |
| >Mp1g02250.1 ATGAGCTACG CAGAGGACGA GGGTTCAGGC AGGCCCAAGC TTAGCCTGCA GCCAAGAGGA TCTGGAGCCG ATCAAGCACC CTCTACACCT TCCAAAACTA GCAAGCCCAA CCCTTTTGGT GCGGCACGAC CTCGAGAACA AGTAATTGCT GAAAGAGAAG GCAAGAAGGA GACTGAAGTT CTGAGAGAGC AAGCACAAAA GGAATGGAAG CCAAGTATCG TCTTATCAGA GTCTCAACGA GAAGAGAAAA AAGCGGTTGA AGCAGAGCTT GCGTTTGCAA AAAGTGAACT CAAGAAGGAA GTCGATCCTG TCAAATCTAA ACTTATGAAA GAGGAAGTTG CGAATATGGA GAAAAAGCTT GAGGAGCTTT TGGCATCTTT TGAGAAAATG GCAGTCCAAA CCGCTCAGAC CGGTGGTCTA AGACGCCCAT ACGAAAAGAG GAGAGACGAT GAGCGATTAC CTGCAGCTGC CTTGCCTGTC GGGGGCGGTT ATGGCGGGGT TGAAAGTCAC GATAGTTATA ACAACTTTGG TAGGAGCAAA GATCGTGACT CTGACAGGGT AGGATCTTAT GGTGATACCT GGAGTGCCAA AGGAGGCGGT GGTGCCGGAG GTGGCAAGGG TGCTGGCTCA CAGTGTTTCA GTTGTGGAGA GATGGGACAC TTTTCGCGGG AATGCCCAAG TGGAGGAGTC GGTGGTGGTA GAGGAGGGTA TGGAGGTAAC TTTGGAGGCG GAGGTGGCAG GAGTGGATCG CGCGCTTGTT ATACCTGTGG CCAAGAGGGT CACATCTCTC GGGAATGTCC GCAGGCCGGA AGTGGAGGAT ATGGAGCCCG TGGGGGTGGC GGTTATGGTT CTGCCGGGGG TAGCTATGGC GCGTCATACG GTGGAGGTTA TGGTAGCAGT GCCCCAGATT ATGACACTGG AGCATCTTAT GGCCCAGCTA GTCAAGGGGG AGGTGCTTAC GCCGCCGGAG GTACTTATGA CGACCGTGTG TCATATGGGG GTACGGGTGC TCGTGGAAGT GCAGGTGGTT ACTCAAGATG GGAAGGTCAT TAA |
Protein |
| >Mp1g02250.1 MSYAEDEGSG RPKLSLQPRG SGADQAPSTP SKTSKPNPFG AARPREQVIA EREGKKETEV LREQAQKEWK PSIVLSESQR EEKKAVEAEL AFAKSELKKE VDPVKSKLMK EEVANMEKKL EELLASFEKM AVQTAQTGGL RRPYEKRRDD ERLPAAALPV GGGYGGVESH DSYNNFGRSK DRDSDRVGSY GDTWSAKGGG GAGGGKGAGS QCFSCGEMGH FSRECPSGGV GGGRGGYGGN FGGGGGRSGS RACYTCGQEG HISRECPQAG SGGYGARGGG GYGSAGGSYG ASYGGGYGSS APDYDTGASY GPASQGGGAY AAGGTYDDRV SYGGTGARGS AGGYSRWEGH |