Mp1g05420



Description

Annotation

Database ID Description
SUPERFAMILY SSF50978 WD40 repeat-like
SMART SM00320 WD40_4
Gene3D G3DSA:2.130.10.10 -
PANTHER PTHR11227 WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED
Pfam PF21032 PROPPIN
MobiDBLite mobidb-lite consensus disorder prediction
KEGG K22991 WD repeat-containing protein 45
KOG KOG2111 Uncharacterized conserved protein, contains WD40 repeats; [S]
MapolyID Mapoly0005s0065 -
GO GO:0032266 phosphatidylinositol-3-phosphate binding
GO GO:0080025 phosphatidylinositol-3,5-bisphosphate binding
GO GO:0034045 phagophore assembly site membrane
GO GO:0034497 protein localization to phagophore assembly site
GO GO:0006497 protein lipidation
GO GO:0005515 protein binding
GO GO:0044804 nucleophagy
GO GO:0019898 extrinsic component of membrane
GO GO:0005829 cytosol
GO GO:0000422 autophagy of mitochondrion

Nomenclature

Gene symbol Product Transcript ID Status
MpATG18b Autophagy protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g05420.1 chr1:5861192..5865859 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g05420.2 chr1:5861192..5865859 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g05420.3 chr1:5861192..5865859 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g05420.4 chr1:5861192..5865859 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g05420.5 chr1:5862003..5865859 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.