Mp1g05560



Description

Annotation

Database ID Description
FunFam G3DSA:1.25.40.180:FF:000029 Nuclear cap-binding protein
FunFam G3DSA:1.25.40.180:FF:000040 Nuclear cap-binding protein subunit 1
PANTHER PTHR12412 CAP BINDING PROTEIN
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF02854 MIF4G domain
Pfam PF09090 MIF4G like
Gene3D G3DSA:1.25.40.180 -
SUPERFAMILY SSF48371 ARM repeat
SMART SM00543 if4_15
Pfam PF09088 MIF4G like
KEGG K12882 nuclear cap-binding protein subunit 1
KOG KOG1104 Nuclear cap-binding complex, subunit NCBP1/CBP80; [A]
MapolyID Mapoly0005s0051 -
GO GO:0005634 nucleus
GO GO:0003723 RNA binding
GO GO:0000339 RNA cap binding
GO GO:0005846 nuclear cap binding complex
GO GO:0005515 protein binding
GO GO:0006406 mRNA export from nucleus
GO GO:0016070 RNA metabolic process
GO GO:0003729 mRNA binding
GO GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO GO:0005845 obsolete mRNA cap binding complex

Nomenclature

Gene symbol Product Transcript ID Status
MpCBP80 RNA-binding protein Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g05560.1 chr1:6010133..6019191 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.