Mp1g06040



Description

Annotation

Database ID Description
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
SUPERFAMILY SSF82199 SET domain
ProSiteProfiles PS51215 AWS domain profile.
Pfam PF00856 SET domain
CDD cd15565 PHD2_NSD
SMART SM00249 PHD_3
CDD cd15566 PHD3_NSD
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
PANTHER PTHR22884 SET DOMAIN PROTEINS
CDD cd19175 SET_ASHR3-like
SMART SM00570 shorttest3
Gene3D G3DSA:2.30.30.140 -
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
Pfam PF17907 AWS domain
ProSitePatterns PS01359 Zinc finger PHD-type signature.
SMART SM00317 set_7
SMART SM00508 PostSET_3
SMART SM00333 TUDOR_7
ProSiteProfiles PS50868 Post-SET domain profile.
ProSiteProfiles PS51578 Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile.
CDD cd20404 Tudor_Agenet_AtEML-like
Gene3D G3DSA:2.170.270.10 SET domain
SUPERFAMILY SSF63748 Tudor/PWWP/MBT
ProSiteProfiles PS50280 SET domain profile.
KOG KOG4442 Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis; C-term missing; [U]
KOG KOG4299 PHD Zn-finger protein; C-term missing; [R]
KOG KOG4443 Putative transcription factor HALR/MLL3, involved in embryonic development; C-term missing; [R]
MapolyID Mapoly0005s0005 -
GO GO:0005634 nucleus
GO GO:0005515 protein binding
GO GO:0042054 histone methyltransferase activity
GO GO:0000785 chromatin
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0046975 histone H3K36 methyltransferase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpASHR1 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g06040.1 chr1:6380117..6391768 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.