Mp1g06200



Description

Annotation

Database ID Description
SMART SM00648 surpneu2
Pfam PF07713 Protein of unknown function (DUF1604)
ProSiteProfiles PS50128 SURP motif repeat profile.
Gene3D G3DSA:1.10.10.790 Surp module
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR13384 G PATCH DOMAIN-CONTAINING PROTEIN 1
ProSiteProfiles PS50174 G-patch domain profile.
SUPERFAMILY SSF109905 Surp module (SWAP domain)
Pfam PF01805 Surp module
Coils Coil Coil
KEGG K13123 G patch domain-containing protein 1
KOG KOG2138 Predicted RNA binding protein, contains G-patch domain; [A]
MapolyID Mapoly0043s0012 -
GO GO:0005634 nucleus
GO GO:0003723 RNA binding
GO GO:0006396 RNA processing
GO GO:0003676 nucleic acid binding
GO GO:0006397 mRNA processing

Nomenclature

Gene symbol Product Transcript ID Status
MpTGH G PATCH DOMAIN-CONTAINING PROTEIN 1 Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g06200.1 chr1:6717621..6728201 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g06200.2 chr1:6717774..6728201 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.