| Database | ID | Description |
|---|---|---|
| SMART | SM00398 | hmgende2 |
| Pfam | PF00505 | HMG (high mobility group) box |
| SMART | SM00501 | bright_3 |
| Gene3D | G3DSA:1.10.150.60 | - |
| SUPERFAMILY | SSF46774 | ARID-like |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| ProSiteProfiles | PS50118 | HMG boxes A and B DNA-binding domains profile. |
| SUPERFAMILY | SSF47095 | HMG-box |
| CDD | cd22009 | HMG-box_AtHMGB9-like |
| ProSiteProfiles | PS51011 | ARID domain profile. |
| Gene3D | G3DSA:1.10.30.10 | High mobility group box domain |
| PANTHER | PTHR46691 | HIGH MOBILITY GROUP B PROTEIN 9 |
| SMART | SM01014 | ARID_2 |
| Pfam | PF01388 | ARID/BRIGHT DNA binding domain |
| CDD | cd16872 | ARID_HMGB9-like |
| KOG | KOG2744 | DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain; N-term missing; C-term missing; [K] |
| KOG | KOG0381 | HMG box-containing protein; [R] |
| MapolyID | Mapoly0043s0128 | - |
| GO | GO:0003677 | DNA binding |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpARID-HMGBOX | transcription factor, ARID-HMGbox | Published |
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g07350.1 GATTATTTCT CATGCCTTTT CGAACTTGCG TTTCTCAAAG GGAGGGAAGC CCGAAAGAAG CTCAATACTA CAAACATTTC TTCAATTTTG GTTCAGACGG TGGTTTCATG TGGCGCTCCC CGCAAGCGTT GCGACGTCTT TCGGGTATTG TTTAATATTT TCTTCAGGCT TACCTGTAGG CAGGAGAAAT TTGGTGTTTT CGGTGTTTGG GCAGAGTTGC GTCTCCGAGA TTTTTCATCT CAGGAAAATT ATGATTGACG ATAGGAAATG TGATACGCGC ACGTCTTTAT CAGTGGGATC CGAAGCTTTG TGCGTCGAGG TTGGGAGATT TATCTGTACT CCTGTGATGA ATGAATCATG TCGTCGTCTA GGAGATTGAA ATCCGCTCGG AATTTCGCTT TATACAGAAC CTGTCATGGT GCCTCTAGTT TCCTGCGAGC GTGGGAGGTC CGAGCTCGTG CTTGTTGTCT GTGAAGAGAT AGCTTTGCTG ATCGTACAGG AGTGACCTGT GCTATGTCCT CTTGGTTAGA CACACTTCTG TACCAGAAAA CACCCTGGAG GGTTTTTTTT TGGGTTGGTT TTTTAGCATC TCAATTGCGC AGTCATGCTC TATCTCTAAG AGCTGGAATG ATGCGAAAGT CAGAAGTGAC TTTCGACTTA CGTATGCTTA CATGGCTTTC GACTTACGTG AAGGCATGGG AAAAGCATCT GAATTATCCA CGTTATATTT TTATGTATTT TACTTCGCTT CTGCATATGA CCTTCTCACA CAAGGAATGT GTGATAGGAG GCCCTTCATG AATTTTGCGA AGTCAGTTCA ATAACCTCGA GCTTTCTTTC GCGCGGAAAG CCCGTCCTTC TGTATTTTAT CAGGCGATGT TGAAGGTTAG GGATGTTGGG TGTCTGCAGG TGTGTTGATA CTTTTTGCAT TCTGCACATT GTAAGGTCAG GAAAGGCCGC TTGTCGAGTA AGCTGAGGGA TTTCAGGCTA AAAGTGCAAT ACTTCAAACG ATATTTGCGA TCCAATCAGA CTCACAGAGC TTGAAGACTT GTGGTGCCCA AGGGGCGTCA CAATTTATGG AGAAGTGATG GAAAATTATT GGCTCATTTC TGAGTCTATG CGGATTATTG GAGTGTGCAG GTTCTCTTAT GCTTGATACC AATTGCTGAA GAGGTTGCGA TTTCAAAATG GCGACCGAAG CGGCTGTAGC AAATGTGCCA CCTTCGGTAC AAACACCAGC TAAAAATGCT GACACTGTAA TGGTGGACGC GAAGGAGAGC CCTGTGGCTG TTCTCAGTAC GCCTGCTCCT GTAACGACCA GTCAAGTCGC ACCAACTCCT CAAGTTGCCA CCCCTCAGAC GCTCGTTCCT GCAATCAACC AGCAAGAATA TCCAGCTGCT GTCGCCTCTA ACGAGGCAGT TATAAGTGAT GAGAGACTTT TTATGGATTC TTTCTACAAA TTCCACGAAG CTTTGAAGTC GAAGCCAACG TAAGTTTTGA AACTTGACAG TGGAATCGCA TTTCTGTTGA CTTAAGCTGC CAAAAGTTTC ATGATTGAAT AGACGGAGTT GCTTTTGGGC AGGATTCCGA AAATGGGCGG GAAAGACTTG AACGTACACC TTCTGTACAA AGAAGTAACA GCTCGTGGAG GCTTGCAACA GGTCTGTCCA ATGTATATAA TGTCACGTGT TACATTTTGC ACGAGTTATA TAGTCATCAA GTGGTGCGAG TTCTTGACAA GTGTAAAGTC TCGAAGTAAA GTCACTTTCA GTGAAGTTCA TTTTAATGTT CGCTTGCACT GCTCAGTTCT TGACCTCGTT ATCGTATGCT ATTGCCACTC TGATATCCGT AAGGTCATCA GAGACAGGAA GTGGAAGGAA ATCACAGGTG CTTTTGAGTT TCCTCGCACT ACAACTAGTG CGTCATATGT CCTTCGGAAG TACTATGTAA ATTTGCTGCA TCATTTTGAA CAAGTTTACA AGAACGGAGC CAAAGGACCT CTTATTCCTC CACCAGGTAT GAGTTTTTCA CAGTAGGGCA TTCTTCCAGA TCAGTGACGT GTTGAAGGGC ATTTTGAAGT TGTATCCTTG TTGAACCTCT TTGGTTTTTT GTTCTCCTCT AGCCAAGAAA TTTTGTTTCA CACGGCTGTG GGTTGGCCGA GAACGTACTT ACGATTTTAT CTTGCTTCGG AGTGAACTTT TTTCATATAC ATATTGAACT TTTATTTCTT CTAAAAGACT CGCTTATTTC CGTGTCCTCT CATGAGAACA GAAAATATCA CTACCGCATG TCTGAAAGAA GACATTTGCA GTTGGAGATT CTGCTACTTT CTGGAGCTTT GGTACCTTGT TTGATCAGAA CTAGATGTGC AAATTCGTAG GTGGGAATGA GGTGTTGGTT GCTCTTATGT TAGCAAAGCT GATGAGGAGT AATCAATTAA TTACCATGCA GCAACTTTAC CTGGGTCAAG CCCGTCTGTC CAACCTGGTG GTGATCCAGC ACTTTCAGAG GGTGGTGATC AAGTCACCAA AAAAAGACCA AGAAAGCGGA AGATACAAAT GCCGCTCATT CCTCAAGGTT TGCCTCGGAT ATTTGACTAG AGACAAACGT TTCAAGTAAC ATGTTGTCTA CCTATAACAG AGGTTTTTTT TAAAAAAATT ACATATTTCT CTCTTTCTGT TCTTCTCTAC GTCTTCATTA GCTATTTCTC TCTTTTTTAG TACATAATTC GAGATTTCTG TTTATTGCAG TGGACCCCGC GGAGGCTATT GGAACGTCAT GCAAGGGCTC AATTGAGGCA AAACTTGACT TTGGATACTT GATTACAATG GTTGTCGGTG GAGAGAAGCT CAAAGGTGTT CTGTATCACG TTCCCACCGG AGTGAAAGTC CCATCTCAGT TCACGAATCT TCCAACCCTG CTGGCCAGTG TTAACGTGGA CGCCGCAAAG ACCACTGTGG AGAGCACCGC TCGTCGCAAA AGAAGGAGAA AGGAGGAGAT GCCAAAGAAG GACCCAAATG CTCCGAGGCC AAACCGGACA GGGTACAATT TCTTTTTCGC TGAACAACGT CAGCGATTGA AGGCTCTGCA TCCTGATAAG GATCGAGATA TCAGTCGAAT GATAGGCGAA GCTTGGAACA GTCTTTCTGA GGAGCAAAAA ACGGTGAGTC AAACAGGGCA TTTAATGGGC ATAGTAAAAC CCGGTTATGG CTCAAAAGCT GACAATGTCA TGTATGTTGT CAGAGTTGAA CTTGAAGCAT GACGATGTGC TTTTCCAAAT GTCATCCAAA ATCGTTTTGT CATGTTCTTA ATTTGCTTTT GAACTGGGAC AGATACGTCC CATGTGTGTG CAAGATGGAA AGCAAGATGC AACATCCTAC TTTGAGAGCT TGTGAGATGA AATTGATCGT CTGCTGTCTC CTGCCATTCT TAAAAGTATG TCCAGGGGAT AAATTTAAAC TAAAGCTCTT GCTTTAAGAT ATGTTGCTAT TCTACTTTAC CTCTGTCTGA TGTTCCCTTC AAGTCTATCA TTAGACTTGA AGTCTAATAC TTTTTCCTTT AGAGCTTGAA AAGGTAAGAC GGCAATATCT GGACCCAATG TCAATGTTGC ACTCGGAACC TTTGATGTGA ATCACACTGA TATCTACATG TGATGAGGTA TACTTGTGAG AATCATCGTC CGCTTATACA GACTTAAGCG AAGGAGGGTC AAAATGGGAC CTAGACTTGC TATTCACTTT CAAAGAGTAC CAGTCACACG CAAGGTCGAC TCTCTTGGTT GCCTACGTAA ACTGCCGAAA GTGAATAGCA AGTTTTAGTG TTTTTTTGGG GGATTATTTA GTTTTACCTT CAACATTGAT GTGTTTTCCT AATTATTCGG AGTAAATTTG GGAGATGAGC CCTCCTTGAA CAGATCCTAC AAGATGAAGC TCTCCATCTC CGATGTGGTC TACTATGCCC GCTAAATGCC CTGTTTGGGA ACTTCCACAA AATCAGTTGA GAATGTCTTT GGCTGCTAAA ATAGTGTGTT TTTGCCACGA TGTCTATAGG TCCCGATTTT GTAGCTCAGG AGTTCTGAAC GTTCCATTTG CATGCAGCCC TACCAAGAAC GAGGTGTGAA AGACAAGGAG AGATTCAAAA GGGAGATGCG TGATTATCGG GAGAAGATGA AAAGCGGCCA CTTTGATAGT GCTGCTGACC TTGGTACAGG GCAGACTGTG ACTTCTCCAG AAGATCCCAG TGTTCCTGAC CAACCCCTTG AGCAAGATCA TGGAAATGCA ATGGGGGATG ATACTCCTCC CACGGGGGAG CCTACGTCTG AGACGCCCCA TCAGCAAACA TCCCATGAAC CATCAAAGGG TGTTCCTGAT CAGTCGTTAA ATCAAGAGAC ACCTGCCTCT GTGGTGTCCA CGCAAGGAGA GGGTTGATAG CTCTTCTTGT AGTTTCTGGA TTTATGTTGG TTGGTAGTAA AGACTAGTAG AGGCAAACGC TTAGTTCATG GTGAGGAAGC CAGCAGTGGC AAGACAGTCT TCCAGTTTTC GATGTACCAT ACATTAGTCA GAGGGTTCAG TGGATAGTCA GTCAGGTTTA GGATTGAAAG GTAGATTCCG GTTTCATTCC AAGCAACCCT GTGGAGGATC TTGCTTCACG ATTGTCATCA TGAAGCGCTT CATCATCCAT CTGCCAACAC TGTACAGAAA TCTGCCATAC TTGGCCAGCT TAGCTTTATT CCCCATGGCG ACCAGCTCCA ACCATTTTCT TCGATATTTA GACGAAAAAA ATCTCATATT CTCGATTGGA AATTCTTTTG TTTC |
mRNA UTR + CDS |
| >Mp1g07350.1 GATTATTTCT CATGCCTTTT CGAACTTGCG TTTCTCAAAG GGAGGGAAGC CCGAAAGAAG CTCAATACTA CAAACATTTC TTCAATTTTG GTTCAGACGG TGGTTTCATG TGGCGCTCCC CGCAAGCGTT GCGACGTCTT TCGGGTTCTC TTATGCTTGA TACCAATTGC TGAAGAGGTT GCGATTTCAA AATGGCGACC GAAGCGGCTG TAGCAAATGT GCCACCTTCG GTACAAACAC CAGCTAAAAA TGCTGACACT GTAATGGTGG ACGCGAAGGA GAGCCCTGTG GCTGTTCTCA GTACGCCTGC TCCTGTAACG ACCAGTCAAG TCGCACCAAC TCCTCAAGTT GCCACCCCTC AGACGCTCGT TCCTGCAATC AACCAGCAAG AATATCCAGC TGCTGTCGCC TCTAACGAGG CAGTTATAAG TGATGAGAGA CTTTTTATGG ATTCTTTCTA CAAATTCCAC GAAGCTTTGA AGTCGAAGCC AACGATTCCG AAAATGGGCG GGAAAGACTT GAACGTACAC CTTCTGTACA AAGAAGTAAC AGCTCGTGGA GGCTTGCAAC AGGTCATCAG AGACAGGAAG TGGAAGGAAA TCACAGGTGC TTTTGAGTTT CCTCGCACTA CAACTAGTGC GTCATATGTC CTTCGGAAGT ACTATGTAAA TTTGCTGCAT CATTTTGAAC AAGTTTACAA GAACGGAGCC AAAGGACCTC TTATTCCTCC ACCAGCAACT TTACCTGGGT CAAGCCCGTC TGTCCAACCT GGTGGTGATC CAGCACTTTC AGAGGGTGGT GATCAAGTCA CCAAAAAAAG ACCAAGAAAG CGGAAGATAC AAATGCCGCT CATTCCTCAA GTGGACCCCG CGGAGGCTAT TGGAACGTCA TGCAAGGGCT CAATTGAGGC AAAACTTGAC TTTGGATACT TGATTACAAT GGTTGTCGGT GGAGAGAAGC TCAAAGGTGT TCTGTATCAC GTTCCCACCG GAGTGAAAGT CCCATCTCAG TTCACGAATC TTCCAACCCT GCTGGCCAGT GTTAACGTGG ACGCCGCAAA GACCACTGTG GAGAGCACCG CTCGTCGCAA AAGAAGGAGA AAGGAGGAGA TGCCAAAGAA GGACCCAAAT GCTCCGAGGC CAAACCGGAC AGGGTACAAT TTCTTTTTCG CTGAACAACG TCAGCGATTG AAGGCTCTGC ATCCTGATAA GGATCGAGAT ATCAGTCGAA TGATAGGCGA AGCTTGGAAC AGTCTTTCTG AGGAGCAAAA AACGCCCTAC CAAGAACGAG GTGTGAAAGA CAAGGAGAGA TTCAAAAGGG AGATGCGTGA TTATCGGGAG AAGATGAAAA GCGGCCACTT TGATAGTGCT GCTGACCTTG GTACAGGGCA GACTGTGACT TCTCCAGAAG ATCCCAGTGT TCCTGACCAA CCCCTTGAGC AAGATCATGG AAATGCAATG GGGGATGATA CTCCTCCCAC GGGGGAGCCT ACGTCTGAGA CGCCCCATCA GCAAACATCC CATGAACCAT CAAAGGGTGT TCCTGATCAG TCGTTAAATC AAGAGACACC TGCCTCTGTG GTGTCCACGC AAGGAGAGGG TTGATAGCTC TTCTTGTAGT TTCTGGATTT ATGTTGGTTG GTAGTAAAGA CTAGTAGAGG CAAACGCTTA GTTCATGGTG AGGAAGCCAG CAGTGGCAAG ACAGTCTTCC AGTTTTCGAT GTACCATACA TTAGTCAGAG GGTTCAGTGG ATAGTCAGTC AGGTTTAGGA TTGAAAGGTA GATTCCGGTT TCATTCCAAG CAACCCTGTG GAGGATCTTG CTTCACGATT GTCATCATGA AGCGCTTCAT CATCCATCTG CCAACACTGT ACAGAAATCT GCCATACTTG GCCAGCTTAG CTTTATTCCC CATGGCGACC AGCTCCAACC ATTTTCTTCG ATATTTAGAC GAAAAAAATC TCATATTCTC GATTGGAAAT TCTTTTGTTT C |
CDS |
| >Mp1g07350.1 ATGGCGACCG AAGCGGCTGT AGCAAATGTG CCACCTTCGG TACAAACACC AGCTAAAAAT GCTGACACTG TAATGGTGGA CGCGAAGGAG AGCCCTGTGG CTGTTCTCAG TACGCCTGCT CCTGTAACGA CCAGTCAAGT CGCACCAACT CCTCAAGTTG CCACCCCTCA GACGCTCGTT CCTGCAATCA ACCAGCAAGA ATATCCAGCT GCTGTCGCCT CTAACGAGGC AGTTATAAGT GATGAGAGAC TTTTTATGGA TTCTTTCTAC AAATTCCACG AAGCTTTGAA GTCGAAGCCA ACGATTCCGA AAATGGGCGG GAAAGACTTG AACGTACACC TTCTGTACAA AGAAGTAACA GCTCGTGGAG GCTTGCAACA GGTCATCAGA GACAGGAAGT GGAAGGAAAT CACAGGTGCT TTTGAGTTTC CTCGCACTAC AACTAGTGCG TCATATGTCC TTCGGAAGTA CTATGTAAAT TTGCTGCATC ATTTTGAACA AGTTTACAAG AACGGAGCCA AAGGACCTCT TATTCCTCCA CCAGCAACTT TACCTGGGTC AAGCCCGTCT GTCCAACCTG GTGGTGATCC AGCACTTTCA GAGGGTGGTG ATCAAGTCAC CAAAAAAAGA CCAAGAAAGC GGAAGATACA AATGCCGCTC ATTCCTCAAG TGGACCCCGC GGAGGCTATT GGAACGTCAT GCAAGGGCTC AATTGAGGCA AAACTTGACT TTGGATACTT GATTACAATG GTTGTCGGTG GAGAGAAGCT CAAAGGTGTT CTGTATCACG TTCCCACCGG AGTGAAAGTC CCATCTCAGT TCACGAATCT TCCAACCCTG CTGGCCAGTG TTAACGTGGA CGCCGCAAAG ACCACTGTGG AGAGCACCGC TCGTCGCAAA AGAAGGAGAA AGGAGGAGAT GCCAAAGAAG GACCCAAATG CTCCGAGGCC AAACCGGACA GGGTACAATT TCTTTTTCGC TGAACAACGT CAGCGATTGA AGGCTCTGCA TCCTGATAAG GATCGAGATA TCAGTCGAAT GATAGGCGAA GCTTGGAACA GTCTTTCTGA GGAGCAAAAA ACGCCCTACC AAGAACGAGG TGTGAAAGAC AAGGAGAGAT TCAAAAGGGA GATGCGTGAT TATCGGGAGA AGATGAAAAG CGGCCACTTT GATAGTGCTG CTGACCTTGG TACAGGGCAG ACTGTGACTT CTCCAGAAGA TCCCAGTGTT CCTGACCAAC CCCTTGAGCA AGATCATGGA AATGCAATGG GGGATGATAC TCCTCCCACG GGGGAGCCTA CGTCTGAGAC GCCCCATCAG CAAACATCCC ATGAACCATC AAAGGGTGTT CCTGATCAGT CGTTAAATCA AGAGACACCT GCCTCTGTGG TGTCCACGCA AGGAGAGGGT TGA |
Protein |
| >Mp1g07350.1 MATEAAVANV PPSVQTPAKN ADTVMVDAKE SPVAVLSTPA PVTTSQVAPT PQVATPQTLV PAINQQEYPA AVASNEAVIS DERLFMDSFY KFHEALKSKP TIPKMGGKDL NVHLLYKEVT ARGGLQQVIR DRKWKEITGA FEFPRTTTSA SYVLRKYYVN LLHHFEQVYK NGAKGPLIPP PATLPGSSPS VQPGGDPALS EGGDQVTKKR PRKRKIQMPL IPQVDPAEAI GTSCKGSIEA KLDFGYLITM VVGGEKLKGV LYHVPTGVKV PSQFTNLPTL LASVNVDAAK TTVESTARRK RRRKEEMPKK DPNAPRPNRT GYNFFFAEQR QRLKALHPDK DRDISRMIGE AWNSLSEEQK TPYQERGVKD KERFKREMRD YREKMKSGHF DSAADLGTGQ TVTSPEDPSV PDQPLEQDHG NAMGDDTPPT GEPTSETPHQ QTSHEPSKGV PDQSLNQETP ASVVSTQGEG |