Mp1g08030



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd15844 SNARE_syntaxin5
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
Pfam PF11416 Syntaxin-5 N-terminal, Sly1p-binding domain
Gene3D G3DSA:1.20.58.70 -
PANTHER PTHR19957 SYNTAXIN
Pfam PF05739 SNARE domain
SMART SM00397 tSNARE_6
SUPERFAMILY SSF47661 t-snare proteins
KEGG K08490 syntaxin 5
KOG KOG0812 SNARE protein SED5/Syntaxin 5; [U]
MapolyID Mapoly0036s0047 -
GO GO:0000149 SNARE binding
GO GO:0016192 vesicle-mediated transport
GO GO:0006906 vesicle fusion
GO GO:0012505 endomembrane system
GO GO:0031201 SNARE complex
GO GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport
GO GO:0006886 intracellular protein transport
GO GO:0000139 Golgi membrane
GO GO:0048278 vesicle docking
GO GO:0016021 membrane
GO GO:0016020 membrane
GO GO:0005484 SNAP receptor activity

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP3 Ortholog of Arabidopsis SYP3 genes Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g08030.1 chr1:8620556..8626500 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g08030.2 chr1:8620462..8626500 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.