Mp1g10310



Description

Annotation

Database ID Description
CDD cd11659 SANT_CDC5_II
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50090 Myb-like domain profile.
Coils Coil Coil
Gene3D G3DSA:1.10.10.60 -
FunFam G3DSA:1.10.10.60:FF:000091 CDC5 cell division cycle 5-like
Pfam PF11831 pre-mRNA splicing factor component
SUPERFAMILY SSF46689 Homeodomain-like
SMART SM00717 sant
FunFam G3DSA:1.10.10.60:FF:000021 CDC5 cell division cycle 5-like
CDD cd00167 SANT
PANTHER PTHR45885 CELL DIVISION CYCLE 5-LIKE PROTEIN
Pfam PF13921 Myb-like DNA-binding domain
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
KEGG K12860 pre-mRNA-splicing factor CDC5/CEF1
KOG KOG0050 mRNA splicing protein CDC5 (Myb superfamily); [AD]
MapolyID Mapoly0014s0195 -
GO GO:0005681 spliceosomal complex
GO GO:0000974 Prp19 complex
GO GO:0000398 mRNA splicing, via spliceosome

Nomenclature

Gene symbol Product Transcript ID Status
MpCDC5 transcription factor, MYB Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g10310.1 chr1:10934366..10941099 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.