Mp1g11660



Description

Annotation

Database ID Description
CDD cd00086 homeodomain
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50071 'Homeobox' domain profile.
SUPERFAMILY SSF46689 Homeodomain-like
Gene3D G3DSA:1.10.10.60 -
SMART SM00389 HOX_1
Pfam PF00046 Homeodomain
PANTHER PTHR46777 WUSCHEL-RELATED HOMEOBOX 13
KOG KOG0492 Transcription factor MSH, contains HOX domain; [R]
KOG KOG0483 Transcription factor HEX, contains HOX and HALZ domains; N-term missing; [K]
MapolyID Mapoly0014s0060 -
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpHD6 transcription factor, HD, homeodomain protein Published
MpWOX transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g11660.1 chr1:12183561..12190800 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g11660.2 chr1:12183644..12190800 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.