Mp1g12840



Description

Annotation

Database ID Description
PANTHER PTHR13040 AUTOPHAGY PROTEIN 5
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:3.10.20.90 -
Pfam PF04106 Autophagy protein ATG5, UblB domain
Pfam PF20637 Autophagy protein ATG5, alpha-helical bundle region
Gene3D G3DSA:3.10.20.620 -
Gene3D G3DSA:1.10.246.190 Autophagy protein Apg5, helix rich domain
Pfam PF20638 Autophagy protein ATG5, UblA domain
FunFam G3DSA:3.10.20.620:FF:000002 Autophagy protein 5
KEGG K08339 autophagy-related protein 5
KOG KOG2976 Protein involved in autophagy and nutrient starvation; C-term missing; [O]
MapolyID Mapoly0019s0054 -
GO GO:0006995 cellular response to nitrogen starvation
GO GO:0006501 C-terminal protein lipidation
GO GO:0000045 autophagosome assembly
GO GO:0034274 Atg12-Atg5-Atg16 complex
GO GO:0019776 Atg8-family ligase activity
GO GO:0034045 phagophore assembly site membrane
GO GO:0006914 autophagy
GO GO:0044804 nucleophagy
GO GO:0005737 cytoplasm
GO GO:0000422 autophagy of mitochondrion

Nomenclature

Gene symbol Product Transcript ID Status
MpATG5 Autophagy protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g12840.1 chr1:13261545..13266773 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g12840.2 chr1:13261638..13266758 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.