Mp1g17210



Description

Annotation

Database ID Description
ProSiteProfiles PS50090 Myb-like domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF13921 Myb-like DNA-binding domain
CDD cd00167 SANT
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
PANTHER PTHR45614 MYB PROTEIN-RELATED
FunFam G3DSA:1.10.10.60:FF:000010 Transcriptional activator Myb isoform A
SMART SM00717 sant
Gene3D G3DSA:1.10.10.60 -
SUPERFAMILY SSF46689 Homeodomain-like
KOG KOG0048 Transcription factor, Myb superfamily; [K]
MapolyID Mapoly0001s0061 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0005634 nucleus
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
MpR2R3-MYB1 transcription factor, MYB Published
MpFGMYB FEMALE GAMETOPHYTE-SPECIFIC MYB Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g17210.1 chr1:18026262..18033372 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g17210.2 chr1:18026116..18033372 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g17210.3 chr1:18026262..18032046 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g17210.4 chr1:18026262..18032046 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.