Mp1g17720



Description

Annotation

Database ID Description
Gene3D G3DSA:2.60.120.430 -
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
FunFam G3DSA:3.30.200.20:FF:000394 Leucine-rich repeat receptor-like protein kinase
ProSiteProfiles PS50011 Protein kinase domain profile.
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
Pfam PF12819 Malectin-like domain
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
FunFam G3DSA:3.80.10.10:FF:000383 Leucine-rich repeat receptor protein kinase EMS1
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
Pfam PF00560 Leucine Rich Repeat
FunFam G3DSA:1.10.510.10:FF:001703 Predicted protein
SMART SM00220 serkin_6
PANTHER PTHR45631 OS07G0107800 PROTEIN-RELATED
CDD cd14066 STKc_IRAK
ProSiteProfiles PS51450 Leucine-rich repeat profile.
SUPERFAMILY SSF52058 L domain-like
Pfam PF07714 Protein tyrosine and serine/threonine kinase
KOG KOG1187 Serine/threonine protein kinase; [T]
KOG KOG0617 Ras suppressor protein (contains leucine-rich repeats); N-term missing; C-term missing; [T]
MapolyID Mapoly0001s0111 -
GO GO:0006468 protein phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0005515 protein binding
GO GO:0005524 ATP binding

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Receptor-kinase locus reported as the closest M. polymorpha match (full-length and ectodomain) to the Closterium sexual-reproduction kinase CpRLK1, arguing that CpRLK1 is not a CrRLK1L ortholog.

0 core 1 peripheral

Mecchia, M.A., et al. (2022) · Development  research sequence background
Receptor-kinase locus reported as the closest M. polymorpha match (full-length and ectodomain) to the Closterium sexual-reproduction kinase CpRLK1, arguing that CpRLK1 is not a CrRLK1L ortholog.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g17720.1 chr1:18503749..18510839 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g17720 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g17720 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.