Mp1g19070



Description

Annotation

Database ID Description
PIRSF PIRSF027109 Golgi_SNARE
PANTHER PTHR21094 GOS-28 SNARE- RELATED
Pfam PF12352 Snare region anchored in the vesicle membrane C-terminus
KEGG K08495 golgi SNAP receptor complex member 1
KOG KOG3208 SNARE protein GS28; [U]
MapolyID Mapoly0001s0245 -
GO GO:0006906 vesicle fusion
GO GO:0005801 cis-Golgi network
GO GO:0031201 SNARE complex
GO GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport
GO GO:0000139 Golgi membrane
GO GO:0005797 Golgi medial cisterna
GO GO:0016020 membrane
GO GO:0005484 SNAP receptor activity

Nomenclature

Gene symbol Product Transcript ID Status
MpGOS11 Ortholog of Arabidopsis GOS11 gene Published

Associated Literature (AI-based literature mining, Beta-version)

Ortholog of Arabidopsis GOS11 gene; The transcript is detected in thalli, antheridiophores, archegoniophores, and sporelings. Citrine-tagged MpGOS11 driven by the cauliflower mosaic virus 35S promoter is localized to the Golgi apparatus. (from nomenclature)

0 core 4 peripheral

Bowman, J. L., et al. (2022) · Plant Cell  review citation comparator
Marchantia gene cited in Bowman et al. (2022) model-system review
Minamino, N., et al. (2022) · Development  research experimental comparator
Golgi SNARE examined during spermiogenesis.
Kanazawa, T., et al. (2022) · Frontiers in Plant Science  research experimental tool
Golgi apparatus marker (mCitrine-MpGOS11); used for colocalization showing MpSEC28-mCherry localizes to COPI-coated vesicles at the Golgi periphery.
Kanazawa, T., et al. (2020) · Nature Communications  research experimental tool
Golgi SNARE marker; compartment control.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g19070.1 chr1:20008410..20011957 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g19070 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g19070 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.