Mp1g21150



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF04153 NOT2/NOT3/NOT5 C-terminal
PANTHER PTHR23326 CCR4 NOT-RELATED
Gene3D G3DSA:2.30.30.1020 -
KEGG K12605 CCR4-NOT transcription complex subunit 2
KOG KOG2151 Predicted transcriptional regulator; N-term missing; [KDR]
KOG KOG2150 CCR4-NOT transcriptional regulation complex, NOT5 subunit; N-term missing; [K]
MapolyID Mapoly0001s0449 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0000932 P-body
GO GO:0030015 CCR4-NOT core complex
GO GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening

Nomenclature

Gene symbol Product Transcript ID Status
MpNOT2a transcriptional regulator Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g21150.1 chr1:22191070..22205576 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g21150.2 chr1:22191070..22205576 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g21150.3 chr1:22191085..22205576 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g21150.4 chr1:22191085..22205576 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.