Mp1g23280



Description

Annotation

Database ID Description
Gene3D G3DSA:1.10.238.10 -
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF12763 Cytoskeletal-regulatory complex EF hand
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile.
PANTHER PTHR11216 EH DOMAIN
Coils Coil Coil
SMART SM00027 eh_3
SMART SM00054 efh_1
CDD cd00052 EH
Pfam PF13202 EF hand
ProSiteProfiles PS50031 EH domain profile.
SUPERFAMILY SSF47473 EF-hand
KEGG K12472 epidermal growth factor receptor substrate 15
KOG KOG0998 Synaptic vesicle protein EHS-1 and related EH domain proteins; [TU]
KOG KOG2092 Uncharacterized conserved protein; C-term missing; [S]
MapolyID Mapoly0065s0050 -
GO GO:0005509 calcium ion binding
GO GO:0005515 protein binding
GO GO:0006897 endocytosis
GO GO:0005886 plasma membrane
GO GO:0016197 endosomal transport
GO GO:0005737 cytoplasm

Nomenclature

Gene symbol Product Transcript ID Status
MpSRI2-like Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g23280.1 chr1:24777934..24786238 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.