Mp1g26800



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Coils Coil Coil
ProSiteProfiles PS50868 Post-SET domain profile.
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
Pfam PF16135 Tify domain binding domain
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
Gene3D G3DSA:2.170.270.10 SET domain
SMART SM00317 set_7
Pfam PF13831 PHD-finger
CDD cd10518 SET_SETD1-like
SMART SM00508 PostSET_3
SUPERFAMILY SSF82199 SET domain
ProSiteProfiles PS50280 SET domain profile.
SMART SM00249 PHD_3
ProSiteProfiles PS51805 Extended PHD (ePHD) domain profile.
ProSitePatterns PS01359 Zinc finger PHD-type signature.
Pfam PF13832 PHD-zinc-finger like domain
CDD cd15571 ePHD
Pfam PF00856 SET domain
CDD cd15492 PHD_BRPF_JADE_like
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
PANTHER PTHR45838 HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER
KOG KOG1080 Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases; N-term missing; [BK]
KOG KOG3630 Nuclear pore complex, Nup214/CAN component; N-term missing; [YU]
KOG KOG0681 Actin-related protein - Arp5p; N-term missing; C-term missing; [Z]
MapolyID Mapoly0002s0198 -
GO GO:0005515 protein binding
GO GO:0051568 obsolete histone H3-K4 methylation
GO GO:0042800 histone H3K4 methyltransferase activity
GO GO:0035097 histone methyltransferase complex
GO GO:0045893 positive regulation of DNA-templated transcription

Nomenclature

Gene symbol Product Transcript ID Status
MpATX3 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g26800.1 chr1:28051747..28066201 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.