Mp1g27120
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR33136 | RAPID ALKALINIZATION FACTOR-LIKE |
| Pfam | PF05498 | Rapid ALkalinization Factor (RALF) |
| MapolyID | Mapoly0002s0166 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpRALF3 | cysteine-rich peptide RALF3 | Published |
Associated Literature (AI-based literature mining, Beta-version)
cysteine-rich peptide RALF1; Genome paper: Mapoly0076s0067.1 (from nomenclature)
0 core 2 peripheral
Mecchia, M.A., et al. (2022)
· Development research sequence comparator
One of the three M. polymorpha RALF peptide genes analysed for conservation of the FER-binding surface; the mature peptides cluster with the AtRALF1 subgroup, share the four conserved Cys and the YXXY/YY motifs, and this member carries the RRXL motif required for S1P cleavage. NAMING NOTE: this paper assigns MpRALF1 to Mp1g27120 (Mapoly0002s0166) and MpRALF3 to Mp7g07270 (Mapoly0076s0067), which is the OPPOSITE of the MarpolBase nomenclature (from the genome paper) and of Zhang et al. 2026 (Nat. Plants), where MpRALF1 = Mp7g07270 and MpRALF3 = Mp1g27120 (verified there by qPCR primer sequences). Linked here by the ID stated in this paper, not by name.
Zhang, Y., et al. (2026)
· Nature Plants research experimental background
One of the three Marchantia RALF genes profiled by RT-qPCR (Extended Data Fig. 1a); not antheridia-enriched, so the study focused on MpRALF1. Locus resolved from the paper's MpRALF3-RT-F/R primers (Suppl. Table 2), which match Mp1g27120 - the locus that Mecchia et al. 2022 calls MpRALF1.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g27120 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g27120.1 AAGGGAGTCG ACGGCACTGT GCGAGGTCCG AGGGGCCACA GTGGGAGGAG TCGGAGCAGG CGACAGCGGG ACTCGAACAG TGGAGCGAGC GACTCGAGCA GCTAGAATTT GGACAGGTTT TGCACCAGAG CATGATGCCA GAGAATTGCT GCCGATGCGC TCAATTGTTT ATAGCAATCG CTGGCCAGTC AAAGGTCTTT TTCCCGCCGA TGTGTGGAAT GCTGATGAGC CAGCTTCCGC TTCACTAGAA GTTCAGCCAG CTCCTTCAGC TGCACAACGA GACCCAAGCA CCTCGATCCG TATCCTCTCT CCATCTCCAT CTCCACGCCA TCCCGCCAGC CTCTTCTTCA GCCCCGGGCT GCTGCTGCCG CTGCTTGCTG TAAGTCCACA TTACTAACTC GCCACGTTCG ATTGCTCGGC TTGGCTTCAG AGCACAGGTT GACATACTGA GAGCAGCGCA GCGCAGCAGA TTTTCGTCCT TCGGCTTCTG ACTTCCTTGA CCCGGAGAAT TGCACTCCAT CGACGACGAC GAAGGTCTTC TCGATCCAGT TCTCGGCTTT CGTTCTGCTC TCTCTCTCTC TCTCTCTCTC TTCCCACGAC CGGATCCAGT AGCTAGCTAG GCAGCTGGTG GATCACCCGG ACAGGTGTGG AGTTCCTTGA ATCTGTCGAG TCCACTCGCT GCATCGCACG ACATTTGGAT CACAGGAGGA GCTCGTCACC TCTCGGAGTG CAGTGCAGTG CATTCCATCG CGTTGCAGTG GATTGGATTG GATTGGACAA AGGCGATCTG CCGAGGTTCT CTGCGGCTCA AATCTGGGGT AGTTGGAGCA TTGCAGCGTG GATCGTCGAT AGTTCGATCA TATGGGAGTG CCGGGAGCAG CGGGCGCAGC AGTAGCAGCA GCAGCAGCTC GAGCTCCGGC GGAAGCGATG GATCGACACA AGAAGCGAGG AACGAACGTA CTAATGGTGG TCCTCTTCTC GATGGTGCTG CTGGTGGGCA TGACGAAGAT CCACGCTCTG GTGACATTCT GCGATGAGGA GACGCCGACG ACGGGAGAAT TCGAACAGGA GATTGACACC CGGAGAATGC TGACCGCATC GGAATTGAGC GCAGAAGCCG AGAGGAGATT AGTCGTAGAG GCTGAGATCA GGAGAATTCT CGCCACGAAG AAAAAGTCCA ACACCAAATC CTCGGGCTAC TTCATCAGTT ACAGCGCCCT GTCCGCGAGC CGGACGTCGT GCCCGCCTCG ATCCGGCAGG TCTTACTACA CTCGGAATTG CAATTCTGCA TCCGGACCCG TCCGACCTTA CTCCAGGGGC TGCTCCACCA TTTCTCGATG CGCCAGGGAC TCCGGGTAGA TTGCGGGTCC AGGGTCCGGG CTCTCTCGCT CGCTCGCTCC AGAGCCGATT GCAGCCGCAG AACTCTTTCA CCCTCCGAAT TGTTAATTAA ATCAGTCTGG GAGATGTCTT GTACCCACCA CTTGAATCCG CTTCCGTGCA GGTGTGGGGG GCGGGCAGGC TTCGAGCTTC GAGCTAGCCC GGCGTTTCAT CCCAACGGAA TCGGATATTT GAACCATAAT TGTATTCCAG GAACTCCCTG CTGCAGCCCC CCTCGAGGGG CGTTCATCAT TCATTCATTC ATTATTATCT TTACAGTTTT GTGTGTGTCT ACGTTACTCG GAGGATTTGG CAGATGTTGC AGTGTGTGTC TTCATGTTCC TGTCAGGCAT TCATTCATCT CTTCCGCAGA ATCGTCGAGG CTCTTACTTC CGTTCGATAA TAAAGTCCAC TGCCCGCCCG CCTTGACACT CACTCGAGAG CGGCCCAAGG AACGGAAGCA AATCGAAAAG GGGGAAAAAC AACTTTTGAA CTATTCTAAA CTATATACAC TAATCCTAGG CCGCTTGCCG ATTCATCACC GGGGATTCGG GTGATGGGCT TGTAAAGAAT GCACGAGCGG CGAGCTAGTT AGTGCAGAAA TGCTTCGAGC TCCTCGTGCT CGACAGGTTT ACTAGGACAC GTAGTGACCA GCAGACCTGC TGTACGATGG GAGTAGCTTA TCAAAATTGA GATCCCTCAG TTCAAGAGGG CTTCATAGAA TTTACCGAAC CCCATCCTTC TGGGGCCGAT GTAACCGTGT TCTGCTTCTT TTGACAGTTG ATGAGTTTCA AAACTTTGAT AGGCACCATG AAACTCTGTA ACAACATACC TTCACGTGGA TTCAAAAGTT AAGCGATCTT TCGAAACAGT GACGTAAGAA AAATGGTTTG AAGCCAAGGA GTGTGGGATC TCTCTCTCGA TCTCTTTTCA AACCTCTGCT CTTGCCTGAT TTTCTCTGAC TAGCTAGCTG CCCATGGATC ACTACCATTC GGTCTCTGCT TTGGATGGGT GTCATCTCCG TGCTTCCTCC TCGTGTCAGC CTGTCAAGTG TACCGTGCTA GTCATAGTGG TACTAGTCTG TTGGTGAAGA TGACATATCC GCCCTGTTAT CGTTGTAGAA CTCACCATCG CATCACGTAA ACTCGTGTCT TTCATTTTCA TGTC |
mRNA UTR + CDS |
| >Mp1g27120.1 AAGGGAGTCG ACGGCACTGT GCGAGGTCCG AGGGGCCACA GTGGGAGGAG TCGGAGCAGG CGACAGCGGG ACTCGAACAG TGGAGCGAGC GACTCGAGCA GCTAGAATTT GGACAGGTTT TGCACCAGAG CATGATGCCA GAGAATTGCT GCCGATGCGC TCAATTGTTT ATAGCAATCG CTGGCCAGTC AAAGGTCTTT TTCCCGCCGA TGTGTGGAAT GCTGATGAGC CAGCTTCCGC TTCACTAGAA GTTCAGCCAG CTCCTTCAGC TGCACAACGA GACCCAAGCA CCTCGATCCG TATCCTCTCT CCATCTCCAT CTCCACGCCA TCCCGCCAGC CTCTTCTTCA GCCCCGGGCT GCTGCTGCCG CTGCTTGCTG TAAGTCCACA TTACTAACTC GCCACGTTCG ATTGCTCGGC TTGGCTTCAG AGCACAGGTT GACATACTGA GAGCAGCGCA GCGCAGCAGA TTTTCGTCCT TCGGCTTCTG ACTTCCTTGA CCCGGAGAAT TGCACTCCAT CGACGACGAC GAAGGTCTTC TCGATCCAGT TCTCGGCTTT CGTTCTGCTC TCTCTCTCTC TCTCTCTCTC TTCCCACGAC CGGATCCAGT AGCTAGCTAG GCAGCTGGTG GATCACCCGG ACAGGTGTGG AGTTCCTTGA ATCTGTCGAG TCCACTCGCT GCATCGCACG ACATTTGGAT CACAGGAGGA GCTCGTCACC TCTCGGAGTG CAGTGCAGTG CATTCCATCG CGTTGCAGTG GATTGGATTG GATTGGACAA AGGCGATCTG CCGAGGTTCT CTGCGGCTCA AATCTGGGGT AGTTGGAGCA TTGCAGCGTG GATCGTCGAT AGTTCGATCA TATGGGAGTG CCGGGAGCAG CGGGCGCAGC AGTAGCAGCA GCAGCAGCTC GAGCTCCGGC GGAAGCGATG GATCGACACA AGAAGCGAGG AACGAACGTA CTAATGGTGG TCCTCTTCTC GATGGTGCTG CTGGTGGGCA TGACGAAGAT CCACGCTCTG GTGACATTCT GCGATGAGGA GACGCCGACG ACGGGAGAAT TCGAACAGGA GATTGACACC CGGAGAATGC TGACCGCATC GGAATTGAGC GCAGAAGCCG AGAGGAGATT AGTCGTAGAG GCTGAGATCA GGAGAATTCT CGCCACGAAG AAAAAGTCCA ACACCAAATC CTCGGGCTAC TTCATCAGTT ACAGCGCCCT GTCCGCGAGC CGGACGTCGT GCCCGCCTCG ATCCGGCAGG TCTTACTACA CTCGGAATTG CAATTCTGCA TCCGGACCCG TCCGACCTTA CTCCAGGGGC TGCTCCACCA TTTCTCGATG CGCCAGGGAC TCCGGGTAGA TTGCGGGTCC AGGGTCCGGG CTCTCTCGCT CGCTCGCTCC AGAGCCGATT GCAGCCGCAG AACTCTTTCA CCCTCCGAAT TGTTAATTAA ATCAGTCTGG GAGATGTCTT GTACCCACCA CTTGAATCCG CTTCCGTGCA GGTGTGGGGG GCGGGCAGGC TTCGAGCTTC GAGCTAGCCC GGCGTTTCAT CCCAACGGAA TCGGATATTT GAACCATAAT TGTATTCCAG GAACTCCCTG CTGCAGCCCC CCTCGAGGGG CGTTCATCAT TCATTCATTC ATTATTATCT TTACAGTTTT GTGTGTGTCT ACGTTACTCG GAGGATTTGG CAGATGTTGC AGTGTGTGTC TTCATGTTCC TGTCAGGCAT TCATTCATCT CTTCCGCAGA ATCGTCGAGG CTCTTACTTC CGTTCGATAA TAAAGTCCAC TGCCCGCCCG CCTTGACACT CACTCGAGAG CGGCCCAAGG AACGGAAGCA AATCGAAAAG GGGGAAAAAC AACTTTTGAA CTATTCTAAA CTATATACAC TAATCCTAGG CCGCTTGCCG ATTCATCACC GGGGATTCGG GTGATGGGCT TGTAAAGAAT GCACGAGCGG CGAGCTAGTT AGTGCAGAAA TGCTTCGAGC TCCTCGTGCT CGACAGGTTT ACTAGGACAC GTAGTGACCA GCAGACCTGC TGTACGATGG GAGTAGCTTA TCAAAATTGA GATCCCTCAG TTCAAGAGGG CTTCATAGAA TTTACCGAAC CCCATCCTTC TGGGGCCGAT GTAACCGTGT TCTGCTTCTT TTGACAGTTG ATGAGTTTCA AAACTTTGAT AGGCACCATG AAACTCTGTA ACAACATACC TTCACGTGGA TTCAAAAGTT AAGCGATCTT TCGAAACAGT GACGTAAGAA AAATGGTTTG AAGCCAAGGA GTGTGGGATC TCTCTCTCGA TCTCTTTTCA AACCTCTGCT CTTGCCTGAT TTTCTCTGAC TAGCTAGCTG CCCATGGATC ACTACCATTC GGTCTCTGCT TTGGATGGGT GTCATCTCCG TGCTTCCTCC TCGTGTCAGC CTGTCAAGTG TACCGTGCTA GTCATAGTGG TACTAGTCTG TTGGTGAAGA TGACATATCC GCCCTGTTAT CGTTGTAGAA CTCACCATCG CATCACGTAA ACTCGTGTCT TTCATTTTCA TGTC |
CDS |
| >Mp1g27120.1 ATGGGAGTGC CGGGAGCAGC GGGCGCAGCA GTAGCAGCAG CAGCAGCTCG AGCTCCGGCG GAAGCGATGG ATCGACACAA GAAGCGAGGA ACGAACGTAC TAATGGTGGT CCTCTTCTCG ATGGTGCTGC TGGTGGGCAT GACGAAGATC CACGCTCTGG TGACATTCTG CGATGAGGAG ACGCCGACGA CGGGAGAATT CGAACAGGAG ATTGACACCC GGAGAATGCT GACCGCATCG GAATTGAGCG CAGAAGCCGA GAGGAGATTA GTCGTAGAGG CTGAGATCAG GAGAATTCTC GCCACGAAGA AAAAGTCCAA CACCAAATCC TCGGGCTACT TCATCAGTTA CAGCGCCCTG TCCGCGAGCC GGACGTCGTG CCCGCCTCGA TCCGGCAGGT CTTACTACAC TCGGAATTGC AATTCTGCAT CCGGACCCGT CCGACCTTAC TCCAGGGGCT GCTCCACCAT TTCTCGATGC GCCAGGGACT CCGGGTAG |
Protein |
| >Mp1g27120.1 MGVPGAAGAA VAAAAARAPA EAMDRHKKRG TNVLMVVLFS MVLLVGMTKI HALVTFCDEE TPTTGEFEQE IDTRRMLTAS ELSAEAERRL VVEAEIRRIL ATKKKSNTKS SGYFISYSAL SASRTSCPPR SGRSYYTRNC NSASGPVRPY SRGCSTISRC ARDSG |