Mp1g28760



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM01286 SPT16_2
FunFam G3DSA:2.30.29.210:FF:000002 FACT complex subunit SPT16
FunFam G3DSA:2.30.29.150:FF:000004 FACT complex subunit SPT16
Gene3D G3DSA:2.30.29.30 -
PANTHER PTHR13980 CDC68 RELATED
Coils Coil Coil
Gene3D G3DSA:3.90.230.10 Creatinase/methionine aminopeptidase superfamily
CDD cd01091 CDC68-like
Pfam PF00557 Metallopeptidase family M24
Gene3D G3DSA:3.40.350.10 -
SMART SM01287 Rtt106_2
FunFam G3DSA:2.30.29.30:FF:000017 FACT complex subunit SPT16
Gene3D G3DSA:2.30.29.210 FACT complex subunit Spt16p/Cdc68p
FunFam G3DSA:3.90.230.10:FF:000005 FACT complex subunit spt16
Pfam PF08644 FACT complex subunit (SPT16/CDC68)
Pfam PF21091 FACT complex subunit SPT16, C-terminal domain
Gene3D G3DSA:2.30.29.150 -
Pfam PF08512 Histone chaperone Rttp106-like, middle domain
SUPERFAMILY SSF55920 Creatinase/aminopeptidase
KEGG K25639 FACT complex subunit SPT16
KOG KOG1189 Global transcriptional regulator, cell division control protein; [E]
MapolyID Mapoly0002s0004 -
GO GO:0006368 transcription elongation by RNA polymerase II
GO GO:0031491 nucleosome binding
GO GO:0035101 FACT complex

Nomenclature

Gene symbol Product Transcript ID Status
MpSPT16 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g28760.1 chr1:30028953..30032970 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.