Mp2g00420



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
SMART SM00382 AAA_5
FunFam G3DSA:1.20.920.10:FF:000037 ATPase family AAA domain-containing protein
FunFam G3DSA:3.40.50.300:FF:000061 ATPase family, AAA domain-containing 2
PRINTS PR00503 Bromodomain signature
Pfam PF00439 Bromodomain
SUPERFAMILY SSF47370 Bromodomain
Gene3D G3DSA:1.20.920.10 -
ProSiteProfiles PS50014 Bromodomain profile.
ProSitePatterns PS00674 AAA-protein family signature.
Gene3D G3DSA:3.40.50.300 -
SMART SM00297 bromo_6
PANTHER PTHR23069 AAA DOMAIN-CONTAINING
Gene3D G3DSA:1.10.8.60 -
FunFam G3DSA:1.10.8.60:FF:000016 ATPase family AAA domain-containing protein 2B
Pfam PF00004 ATPase family associated with various cellular activities (AAA)
Pfam PF17862 AAA+ lid domain
KEGG K22531 ATPase family AAA domain-containing protein 2 [EC:3.6.1.-]
KOG KOG0732 AAA+-type ATPase containing the bromodomain; [O]
MapolyID Mapoly0028s0109 -
GO GO:0005634 nucleus
GO GO:0005524 ATP binding
GO GO:0005515 protein binding
GO GO:0016887 ATP hydrolysis activity
GO GO:0003682 chromatin binding
GO GO:0042393 histone binding
GO GO:0045944 positive regulation of transcription by RNA polymerase II

Nomenclature

Gene symbol Product Transcript ID Status
MpBromo3 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g00420.1 chr2:557003..564905 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g00420.2 chr2:556873..564846 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.