Mp2g13600



Description

Annotation

Database ID Description
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
Pfam PF01535 PPR repeat
ProSiteProfiles PS51375 Pentatricopeptide (PPR) repeat profile.
Pfam PF12854 PPR repeat
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile.
Pfam PF13812 Pentatricopeptide repeat domain
SUPERFAMILY SSF81901 HCP-like
PANTHER PTHR47447 OS03G0856100 PROTEIN
Pfam PF13041 PPR repeat family
NCBIfam TIGR00756 pentatricopeptide repeat
KOG KOG4422 Uncharacterized conserved protein; N-term missing; C-term missing; [S]
KOG KOG4318 Bicoid mRNA stability factor; C-term missing; [A]
MapolyID Mapoly0026s0011 -
GO GO:0005515 protein binding

Nomenclature

Gene symbol Product Transcript ID Status
MpPPR_20 Pentatricopeptide repeat proteins Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g13600.1 chr2:14775258..14780178 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g13600.2 chr2:14776901..14780178 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.