Mp2g26400



Description

Annotation

Database ID Description
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR47001 TRANSCRIPTION FACTOR BHLH121
Coils Coil Coil
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
Gene3D G3DSA:4.10.280.10 -
CDD cd11446 bHLH_AtILR3_like
SMART SM00353 finulus
Pfam PF00010 Helix-loop-helix DNA-binding domain
KOG KOG1984 Vesicle coat complex COPII, subunit SFB3; C-term missing; [U]
KOG KOG0977 Nuclear envelope protein lamin, intermediate filament superfamily; C-term missing; [DY]
MapolyID Mapoly0025s0044 -
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0046983 protein dimerization activity
GO GO:0006879 intracellular iron ion homeostasis

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH49 transcription factor, bHLH Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g26400.1 chr2:32362387..32366440 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g26400.2 chr2:32362387..32366440 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.