Mp3g01600



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:3.30.70.330 -
SUPERFAMILY SSF54928 RNA-binding domain, RBD
CDD cd12311 RRM_SRSF2_SRSF8
SMART SM00360 rrm1_1
PANTHER PTHR48028 GLYCINE-RICH RNA-BINDING PROTEIN RZ1A
Pfam PF00076 RNA recognition motif
ProSiteProfiles PS50102 Eukaryotic RNA Recognition Motif (RRM) profile.
FunFam G3DSA:3.30.70.330:FF:000192 Serine/arginine-rich splicing factor SC35
KEGG K12891 serine/arginine-rich splicing factor 2/8
KOG KOG4207 Predicted splicing factor, SR protein superfamily; C-term missing; [A]
MapolyID Mapoly0007s0152 -
GO GO:0003723 RNA binding
GO GO:0003676 nucleic acid binding

Nomenclature

Gene symbol Product Transcript ID Status
MpSR1 SR proteins, RNA-splicing Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g01600.1 chr3:1810666..1817779 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g01600.2 chr3:1810666..1817779 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.