Mp3g06860



Description

Annotation

Database ID Description
Gene3D G3DSA:2.40.50.40 -
Gene3D G3DSA:1.10.10.60 -
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF46689 Homeodomain-like
CDD cd00086 homeodomain
SMART SM00389 HOX_1
ProSiteProfiles PS50071 'Homeobox' domain profile.
Pfam PF16719 SAWADEE domain
Gene3D G3DSA:2.30.30.140 -
PANTHER PTHR33827 PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2
KOG KOG2150 CCR4-NOT transcriptional regulation complex, NOT5 subunit; N-term missing; C-term missing; [K]
MapolyID Mapoly0006s0154 -
GO GO:0003682 chromatin binding
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpHD2 transcription factor, HD, homeodomain protein Published
MpSAWADEE transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g06860.1 chr3:7063925..7073524 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.