| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF12756 | C2H2 type zinc-finger (2 copies) |
| ProSitePatterns | PS00028 | Zinc finger C2H2 type domain signature. |
| SUPERFAMILY | SSF57667 | beta-beta-alpha zinc fingers |
| Pfam | PF12171 | Zinc-finger double-stranded RNA-binding |
| SMART | SM00355 | c2h2final6 |
| PANTHER | PTHR13182 | ZINC FINGER PROTEIN 622 |
| ProSiteProfiles | PS50157 | Zinc finger C2H2 type domain profile. |
| SMART | SM00451 | ZnF_U1_5 |
| Pfam | PF12874 | Zinc-finger of C2H2 type |
| KEGG | K14816 | pre-60S factor REI1 |
| KOG | KOG2785 | C2H2-type Zn-finger protein; [R] |
| MapolyID | Mapoly0085s0044 | - |
| GO | GO:0042273 | ribosomal large subunit biogenesis |
| GO | GO:0003676 | nucleic acid binding |
| GO | GO:0030687 | preribosome, large subunit precursor |
| GO | GO:0008270 | zinc ion binding |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpC2H2-13 | transcription factor, C2H2-ZnF | Published |
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g09820.1 GAGAGCGAGA GCGACATTGC CTCTGTAGGT GTAGGTCGTA GTCGTGGTGG AGCACGTACG TCTGTGGCTT CGAGTTGTTT TTTAACCTCG GCCGCTCGCT CGATTTGGTC CAGGATCGTT TGTTGCGGCT CGACGGGTTT GTGCGTTTTA GGACGGGAGG AGGAATTTGG TGTCGAGAAA TCTCGACTTT TGAAGCGTTG GAACTTTCAC CGCAGGGCAG GGCAGGGAGT TATTGTTAGG GTTTAAGTCG CTGCGAATTG GGAGGTTTTC GGGTCGCTGA GATGCCGGGT CTGGCGTGCA ACGCTTGTAA TGTAGAGTTT CAGGATGAGA CAGGGCAGAA ATCTCACTAT CGGTCTGACT GGCACCGGTA CAATTTGAAG AGAAAGGTAC TCAACTGTGA TAAGAATCAC GTTATGATAG ATTGTGGCTT GGTTATTGGG GTACCTCGTT TCAATGCCGA GGGAATTCAT CTCATATTAG TTCTGTTTGT AGCTTGAGGT GTGGTGGCGC TTTACTGTTT GATAGCGGAG TGCTGCTTTT GGATATGTAC TCGTTGTGCA GTATGCAAGT ATTGAATTCG ATTTGAAGTT CGAATTCAAT ACTTGCATAT ATGTGGAAGG CTGAGCTTTT GAGCGTTTCG CTGCAGTTTG AATCGGCTGG GTCCACGAGC ATGTAGCTTA TCGTCATGCA GTGCCAGTCT AGAATGAAAT GTCATTTTCA TTCCTTCTTT TCACGCACAG CAGACCATCA ACCATCAGAG TATTACAAAG CTTGAATGGA TAGGAGTGGA AGTTCACTAG CATTGAATTA CCCCCCAACT TGGATTAAGA TTTGTAGATC ATGATCACAG CGTAAACACA TTGAACTTTT TTGTCGGGCC CTTTGGTTGC GGTTGCTCAT CAAATTGTAT TCTGCAGGTC GCTGGAGTTC CCGGGGTTAC TGAAGGACTT TTCAACCTGA GGTTAGAGGC ATTGGCTGCA GAGAAGAAGA AGGCGGAAGG ACAGCGTCTG CTTTACAAGT GCTCACTTTG TGGTAAAGAG TATTCAACAG AGAAAGCCCA CATTCAGCAT TTGCAGTCCA AGCTCCATAT CAGCAAGGCT GCCAGTCTTG AAGATTCGTC AGGGGCAGCT GTTGCTGTTG TGAGACCCGC ACCAGCTCGG CCAGTGAAGG AGCAAGTGCC CGTTGTCGAA GCAAAGGAGG AAGACGAAGA GACCGAGACC GAGAGCAGCG ATGAGGAATG GGAAGAAGTT GATGGAGATG AGGCCGAGGA TGCTGTCATG GAGCTTCGGG GCAATGAGGA GGGTTCTGAC GACAGGGCTG GATCTAGTGG TGAAGTAATT GATGAAGAAT GGGACGCAAG CCGCTGTTTT ATTTGTGACT TCCAGCCAGA TGGAAGTATC GAAGGTTGTG TAGAGCACAT GCACAAAGTC CATGGATTTT TCCTCCCTGA TGCCGAATTC TTGAAGGATC CGCAAGGAAT GCTTAGTTAC CTTGGTCTCA AGGTACGCTT ATATCATGCT CTTAAGTCCA GTCTGTGAAG GACATCATGT CCAGGAGTTT TGATTTAAGT CTTGCGAGTT TATGATCCAT CAGATGCTCT TGTTCAGGTT TGAGGTTTGT AATAGTAAGG GGACTAATTG TCTGAACATT CTCTCGAAGG GACTCAAAGA GTCGTCACAG TGGAAGAACT ATGGTGTACA TTGTTTAAGC GGATTGTTGC TCAGCTGAGA AGGTGTTTTG TCCTGACATA GGTAACGAAA GGATTCATGT GCCTATTTTG TGACGATAGA GGTAAGCGCT TCCAAAGCTT AGAAGCAGTG CGGAAGCATA TGGTGTCTAA AAGTCATTGC AAGTTGCGTT ATGGCGACGG AGAAGGTGCA GCAGAGGAAG AACTGGAAGA ATACTACGAT TTCAGTAGCA GGTAATGTGT AATTGTCTTT GATTTTATTT ATCCACTTGG CACATCTGAT TACAGACAAT TCTGGAGCGT TTAGCAACCG CCGTTCACAG CCTGACCTGT TTTGTGTATG TGTATCAGCT ATGTTGGCGC AGACGGGAAA CAGCTTGTGA AAATCGAAGA TGGAGATGAC GCACCCGCCG TGTTAACCAG TGGTGGCCTT GAGCTTATGT TGAAGGGCGA TGATGCTGAA GGAAAGGCAT CTAGAACACT TGGTTCGAGG GAGTTATTCC GCTACTACAA ACAAAAGCCC AAACCATCTG ATCAAAGAGA TGGAATGGTC GTCAACGCAG TTATTGCAAG GTATGGCTGG CACTAGATAA TTTTTTTATG AAATTTACAG ACGGTTTCAG CCATAAAGAC GTCTGTCTTG CATGTTGTAT TTAGGTTGTC TTAAATGGTT CCATAGATAG CATAGATTCT TCGTACTGCT CGTTCCAGTT TATTGAAAAA CATTTCGTTT GGTTTCCTTG AACACTACTA ATTCGTGACA CTCAATTTTC AGATACCGGA GTATGGGACT AGCAACTAGA GAACCAGGGG CAAAATATCC CAAGAGTGCA GATGGGAAGA AAACTAGACA TTCCAGATTA GACCTTATGC GTACACAGAT TGGTATGAGG AATAATGTCA ACTGGGACTT GCCCAGAAAT GTACCATATT AGGAGGAACG GTTGCAGAGT ATCTCTGCTG TCCCGTCTCT TCAGCAAGCT AGCTTACGAA ATAACGAAAT TCAATATTTT TGCAAGCAAT TTTTATCAAC GTGAAAAATA TACTTCTCAA CAATAGTAAA AATTACGCAG GCTACCAATC TCAAATTCCA |
mRNA UTR + CDS |
| >Mp3g09820.1 GAGAGCGAGA GCGACATTGC CTCTGTAGGT GTAGGTCGTA GTCGTGGTGG AGCACGTACG TCTGTGGCTT CGAGTTGTTT TTTAACCTCG GCCGCTCGCT CGATTTGGTC CAGGATCGTT TGTTGCGGCT CGACGGGTTT GTGCGTTTTA GGACGGGAGG AGGAATTTGG TGTCGAGAAA TCTCGACTTT TGAAGCGTTG GAACTTTCAC CGCAGGGCAG GGCAGGGAGT TATTGTTAGG GTTTAAGTCG CTGCGAATTG GGAGGTTTTC GGGTCGCTGA GATGCCGGGT CTGGCGTGCA ACGCTTGTAA TGTAGAGTTT CAGGATGAGA CAGGGCAGAA ATCTCACTAT CGGTCTGACT GGCACCGGTA CAATTTGAAG AGAAAGGTCG CTGGAGTTCC CGGGGTTACT GAAGGACTTT TCAACCTGAG GTTAGAGGCA TTGGCTGCAG AGAAGAAGAA GGCGGAAGGA CAGCGTCTGC TTTACAAGTG CTCACTTTGT GGTAAAGAGT ATTCAACAGA GAAAGCCCAC ATTCAGCATT TGCAGTCCAA GCTCCATATC AGCAAGGCTG CCAGTCTTGA AGATTCGTCA GGGGCAGCTG TTGCTGTTGT GAGACCCGCA CCAGCTCGGC CAGTGAAGGA GCAAGTGCCC GTTGTCGAAG CAAAGGAGGA AGACGAAGAG ACCGAGACCG AGAGCAGCGA TGAGGAATGG GAAGAAGTTG ATGGAGATGA GGCCGAGGAT GCTGTCATGG AGCTTCGGGG CAATGAGGAG GGTTCTGACG ACAGGGCTGG ATCTAGTGGT GAAGTAATTG ATGAAGAATG GGACGCAAGC CGCTGTTTTA TTTGTGACTT CCAGCCAGAT GGAAGTATCG AAGGTTGTGT AGAGCACATG CACAAAGTCC ATGGATTTTT CCTCCCTGAT GCCGAATTCT TGAAGGATCC GCAAGGAATG CTTAGTTACC TTGGTCTCAA GGTAACGAAA GGATTCATGT GCCTATTTTG TGACGATAGA GGTAAGCGCT TCCAAAGCTT AGAAGCAGTG CGGAAGCATA TGGTGTCTAA AAGTCATTGC AAGTTGCGTT ATGGCGACGG AGAAGGTGCA GCAGAGGAAG AACTGGAAGA ATACTACGAT TTCAGTAGCA GCTATGTTGG CGCAGACGGG AAACAGCTTG TGAAAATCGA AGATGGAGAT GACGCACCCG CCGTGTTAAC CAGTGGTGGC CTTGAGCTTA TGTTGAAGGG CGATGATGCT GAAGGAAAGG CATCTAGAAC ACTTGGTTCG AGGGAGTTAT TCCGCTACTA CAAACAAAAG CCCAAACCAT CTGATCAAAG AGATGGAATG GTCGTCAACG CAGTTATTGC AAGATACCGG AGTATGGGAC TAGCAACTAG AGAACCAGGG GCAAAATATC CCAAGAGTGC AGATGGGAAG AAAACTAGAC ATTCCAGATT AGACCTTATG CGTACACAGA TTGGTATGAG GAATAATGTC AACTGGGACT TGCCCAGAAA TGTACCATAT TAGGAGGAAC GGTTGCAGAG TATCTCTGCT GTCCCGTCTC TTCAGCAAGC TAGCTTACGA AATAACGAAA TTCAATATTT TTGCAAGCAA TTTTTATCAA CGTGAAAAAT ATACTTCTCA ACAATAGTAA AAATTACGCA GGCTACCAAT CTCAAATTCC A |
CDS |
| >Mp3g09820.1 ATGCCGGGTC TGGCGTGCAA CGCTTGTAAT GTAGAGTTTC AGGATGAGAC AGGGCAGAAA TCTCACTATC GGTCTGACTG GCACCGGTAC AATTTGAAGA GAAAGGTCGC TGGAGTTCCC GGGGTTACTG AAGGACTTTT CAACCTGAGG TTAGAGGCAT TGGCTGCAGA GAAGAAGAAG GCGGAAGGAC AGCGTCTGCT TTACAAGTGC TCACTTTGTG GTAAAGAGTA TTCAACAGAG AAAGCCCACA TTCAGCATTT GCAGTCCAAG CTCCATATCA GCAAGGCTGC CAGTCTTGAA GATTCGTCAG GGGCAGCTGT TGCTGTTGTG AGACCCGCAC CAGCTCGGCC AGTGAAGGAG CAAGTGCCCG TTGTCGAAGC AAAGGAGGAA GACGAAGAGA CCGAGACCGA GAGCAGCGAT GAGGAATGGG AAGAAGTTGA TGGAGATGAG GCCGAGGATG CTGTCATGGA GCTTCGGGGC AATGAGGAGG GTTCTGACGA CAGGGCTGGA TCTAGTGGTG AAGTAATTGA TGAAGAATGG GACGCAAGCC GCTGTTTTAT TTGTGACTTC CAGCCAGATG GAAGTATCGA AGGTTGTGTA GAGCACATGC ACAAAGTCCA TGGATTTTTC CTCCCTGATG CCGAATTCTT GAAGGATCCG CAAGGAATGC TTAGTTACCT TGGTCTCAAG GTAACGAAAG GATTCATGTG CCTATTTTGT GACGATAGAG GTAAGCGCTT CCAAAGCTTA GAAGCAGTGC GGAAGCATAT GGTGTCTAAA AGTCATTGCA AGTTGCGTTA TGGCGACGGA GAAGGTGCAG CAGAGGAAGA ACTGGAAGAA TACTACGATT TCAGTAGCAG CTATGTTGGC GCAGACGGGA AACAGCTTGT GAAAATCGAA GATGGAGATG ACGCACCCGC CGTGTTAACC AGTGGTGGCC TTGAGCTTAT GTTGAAGGGC GATGATGCTG AAGGAAAGGC ATCTAGAACA CTTGGTTCGA GGGAGTTATT CCGCTACTAC AAACAAAAGC CCAAACCATC TGATCAAAGA GATGGAATGG TCGTCAACGC AGTTATTGCA AGATACCGGA GTATGGGACT AGCAACTAGA GAACCAGGGG CAAAATATCC CAAGAGTGCA GATGGGAAGA AAACTAGACA TTCCAGATTA GACCTTATGC GTACACAGAT TGGTATGAGG AATAATGTCA ACTGGGACTT GCCCAGAAAT GTACCATATT AG |
Protein |
| >Mp3g09820.1 MPGLACNACN VEFQDETGQK SHYRSDWHRY NLKRKVAGVP GVTEGLFNLR LEALAAEKKK AEGQRLLYKC SLCGKEYSTE KAHIQHLQSK LHISKAASLE DSSGAAVAVV RPAPARPVKE QVPVVEAKEE DEETETESSD EEWEEVDGDE AEDAVMELRG NEEGSDDRAG SSGEVIDEEW DASRCFICDF QPDGSIEGCV EHMHKVHGFF LPDAEFLKDP QGMLSYLGLK VTKGFMCLFC DDRGKRFQSL EAVRKHMVSK SHCKLRYGDG EGAAEEELEE YYDFSSSYVG ADGKQLVKIE DGDDAPAVLT SGGLELMLKG DDAEGKASRT LGSRELFRYY KQKPKPSDQR DGMVVNAVIA RYRSMGLATR EPGAKYPKSA DGKKTRHSRL DLMRTQIGMR NNVNWDLPRN VPY |