Mp3g10720



Description

Annotation

Database ID Description
Pfam PF00295 Glycosyl hydrolases family 28
SMART SM00710 pbh1
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:2.160.20.10:FF:000032 Pectin lyase-like superfamily protein
PANTHER PTHR31375 -
Gene3D G3DSA:2.160.20.10 -
SUPERFAMILY SSF51126 Pectin lyase-like
KEGG K01184 polygalacturonase [EC:3.2.1.15]
MapolyID Mapoly0037s0124 -
GO GO:0004650 polygalacturonase activity
GO GO:0005975 carbohydrate metabolic process

Nomenclature

Gene symbol Product Transcript ID Status
MpGH28.1 Cell wall related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g10720.1 chr3:11117713..11122856 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g10720.2 chr3:11116407..11122856 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.