Mp3g16010



Description

Annotation

Database ID Description
Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase
PANTHER PTHR21404 HEN1
SUPERFAMILY SSF54768 dsRNA-binding domain-like
CDD cd02440 AdoMet_MTases
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF18441 Hen1 La-motif C-terminal domain
Pfam PF21224 Small RNA 2'-O-methyltransferase-like, La-motif-containing domain
Pfam PF08242 Methyltransferase domain
Pfam PF17842 Double-stranded RNA binding domain 2
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39
ProSiteProfiles PS50137 Double stranded RNA-binding domain (dsRBD) profile.
Gene3D G3DSA:3.10.50.40 -
Coils Coil Coil
Gene3D G3DSA:3.30.160.20 -
SMART SM00358 DRBM_3
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases
SUPERFAMILY SSF54534 FKBP-like
KEGG K20798 small RNA 2'-O-methyltransferase [EC:2.1.1.386]
KOG KOG1045 Uncharacterized conserved protein HEN1/CORYMBOSA2; C-term missing; [S]
KOG KOG1045 Uncharacterized conserved protein HEN1/CORYMBOSA2; [S]
MapolyID Mapoly0004s0071 -
GO GO:0008173 RNA methyltransferase activity
GO GO:0005634 nucleus
GO GO:0001510 RNA methylation
GO GO:0003755 peptidyl-prolyl cis-trans isomerase activity
GO GO:0030422 siRNA processing
GO GO:0008171 O-methyltransferase activity
GO GO:0034587 piRNA processing
GO GO:0005737 cytoplasm

Nomenclature

Gene symbol Product Transcript ID Status
MpHEN1 miRNA biogenesis protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g16010.1 chr3:16483115..16490106 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.