Mp3g16250



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF08007 JmjC domain
FunFam G3DSA:1.10.10.1500:FF:000001 ribosomal oxygenase 1 isoform X1
ProSiteProfiles PS51184 JmjC domain profile.
Pfam PF21233 Ribosomal oxygenase 1, C-terminal winged helix domain
PANTHER PTHR13096 MINA53 MYC INDUCED NUCLEAR ANTIGEN
Coils Coil Coil
SMART SM00558 cupin_9
Gene3D G3DSA:3.90.930.40 -
CDD cd02208 cupin_RmlC-like
SUPERFAMILY SSF51197 Clavaminate synthase-like
Gene3D G3DSA:2.60.120.650 Cupin
Gene3D G3DSA:1.10.10.1500 -
KEGG K16914 protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69]
KOG KOG3706 Uncharacterized conserved protein; N-term missing; [S]
MapolyID Mapoly0004s0046 -

Nomenclature

Gene symbol Product Transcript ID Status
MpCupin55 Cupin Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g16250.1 chr3:16749867..16754036 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.