Mp3g17350



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd11445 bHLH_AtPIF_like
Coils Coil Coil
Gene3D G3DSA:4.10.280.10 -
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
SMART SM00353 finulus
FunFam G3DSA:4.10.280.10:FF:000004 Basic helix-loop-helix transcription factor
Pfam PF00010 Helix-loop-helix DNA-binding domain
PANTHER PTHR46807 TRANSCRIPTION FACTOR PIF3
KEGG K12126 phytochrome-interacting factor 3
KOG KOG1318 Helix loop helix transcription factor EB; N-term missing; C-term missing; [K]
MapolyID Mapoly0039s0059 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0046983 protein dimerization activity

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH6 transcription factor, bHLH Published
MpPIF phytochrome interacting bHLH transcription factor, PIF Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g17350.1 chr3:18349029..18354627 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g17350.2 chr3:18349029..18354626 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.