Mp3g20900



Description

Annotation

Database ID Description
PANTHER PTHR45846 TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE
Gene3D G3DSA:3.20.20.70 Aldolase class I
Pfam PF01207 Dihydrouridine synthase (Dus)
ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature.
SUPERFAMILY SSF51395 FMN-linked oxidoreductases
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:4.10.1000.10 -
FunFam G3DSA:3.20.20.70:FF:000067 tRNA-dihydrouridine(47) synthase [NAD(P)(+)]
CDD cd02801 DUS_like_FMN
KEGG K05544 tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
KOG KOG2333 Uncharacterized conserved protein; [R]
MapolyID Mapoly0159s0020 -
GO GO:0050660 flavin adenine dinucleotide binding
GO GO:0003723 RNA binding
GO GO:0046872 metal ion binding
GO GO:0008033 tRNA processing
GO GO:0017150 tRNA dihydrouridine synthase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H35 transcription factor, C3H Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g20900.1 chr3:23057620..23063625 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g20900.2 chr3:23057620..23063625 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g20900.3 chr3:23057620..23063625 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g20900.4 chr3:23057620..23063625 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.