| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR31375 | - |
| SMART | SM00710 | pbh1 |
| Pfam | PF00295 | Glycosyl hydrolases family 28 |
| SUPERFAMILY | SSF51126 | Pectin lyase-like |
| Gene3D | G3DSA:2.160.20.10 | - |
| MapolyID | Mapoly0160s0009 | - |
| GO | GO:0004650 | polygalacturonase activity |
| GO | GO:0005975 | carbohydrate metabolic process |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpGH28.4 | Cell wall related protein | Provisional |
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g21140.1 TACTATCTGG ATCAGCATAA AAAACTCATC AAAACTTCGA ATATTTTTTC ACACGGACCT CAGTGGGCCA AAGCTCGAAG AAGATTCTAT TGCTAATCGT CGCCACGGAT CCTAGCTAGA AGATTGTCGT CGTAGTTCTC TATGAGGATG TACAACAAGT CATTTGGTAC AGCAAAGAGT TTCGTGGTGT TTCTGGTTCT CGTGGAGGGA TGGATCAGCG TTTCTATGAG CTTGGCGTTG CCTTCTCCGG AGAGACAACG TATGTCTCAA CACAATGCGA TCGTTCAAGA GTCAGACCGC AGAATGCTTT TGAATTCTTG GCCTCGATTA TGGGGCAATC AGTTCAACGT GCTGACTTAT GGAGCCAAAG GTGATGGCCA GACTTGTGAC ACTAAGGTAT AGCACCACTA TCCAATACCT TCAGATAGTC CGTAAATTGC TTTGCATGTC AATCCGCTCC GTGAAGACAT GCAATCATAT CTGGCGATTG TTTATATTAA TCCTTTTGCA ATTTCTCTCA TGGAAACTGT GGCCAGAAGA CAAACGTAGA GATATGATAG AGGTTCACAA AATCTAATCA ACTGGCATAT TGAATGCTAA TGTGGTAGCC CTCCAGTCAA TCTGCAAATG TCCTGTAAAG ACACTTGCCT GGATATGATC TACGAGGCAC CCATCCTAAG GCGAGGTTTG CAGTTTATAC ATAGCCATCG CTGGATCTAG TGAAGCTTTT GGTGAAAGGA GAAACTGGGC ATTCCGTGTT TAGAAAATAG TGTACACATA CATCACCTAC AAGGATTCAC ATATGCATGA AAATCGAATT TATAAGCAGG TTATTAGCTG AGGTTGACGT CGTTCTACTG CGTCAAGTGG GGATTGTTTC AAATTTCTTG ATAGGATGAT GGGAACTTGA CAGTTTCCAA ATTTACATGA CAGACAAGCA TATGATTAGC TTTGTATGAA ACGGACAGTG AGTAATGTTG TCTTCTTACT TCGAGAAACC AGAACAGAAC TGTGTGTCTC CAGGTATCGT GAACTACGGA ACTTCTTGTT GAGATATACT AATTTGAAGG AAATGCTGAA GATAATGCTG GCTGAGACAA GATTTTGACA ATATGCAGGC CTTTGAATTA GCATGGCTTG GTGCATGCAC ATATGCTGGT GGTGTGATGG TCGTTCCCGC AGGATACGTT TTTCTGGTCG GTCCCATCAT GTTTAAGGGA CCTTGCAGCA CAAATACCCT TGTTCAGGTA TAAGCCATGA TCTCTTTCGA AAACTGGGCA ATGTGTACCA CTCTCAAATT TCTGTTACCT TTGATAATTG TACCTTTTCT CATCGCAATG ACTTAGGATT TCTAACTGAT TGAATGTGAC CATTGTTGCG TTTTGACTCA ATGTAGCATA TTTTGCAGTC CTGATTCAGA AGAGTATATA CTTCGGGTTA ATGAGTGTTT CACCAGCCAA ACTCCGGAGA GATATTAGAA ATCCCGTTTA AATCCTGTTA GGGTCTAACA TGTACACGTG ATTACTGATC TCTTGGATAC AAATAATGAT TTGTGCTAAC TTATAAATCT TGGCGATGAA GGTGGATGGC ACCATATTAA GCATGCCCTC AAATTCAACT GAGTGGCTTG AGTCAAAAAA AATATGGTGG TTGAAGTTCG TGGGTTTGAA TGGACTCACC ATCATGGGAT CAGGTTTAAT CAACGGCAAT GGAGCTTCTT GGTGGTGCAA CTCCTGCAGA AGGGTAAATT GCAGATTTGT TCGGTGCTAT TTAATCTGTA ACCATGAAAT GTTTTTATCC AACACCGGCC ATCGTAAGAA TTCTCATATG CATGGGCAGT GTTCAAAGAT AAACCAGGTC TTCAAGAGTT TACTGAGTAT AGGTAGCTAC GATCGGATTA GGACTTCGAA CGATTGTATA TTGATCCTTA CGAACATTTG CAATGTCGAA CAGGCGGAGG TTCTACCCAA AAGATGCAGA GCGCCGACTG CAGTAAAAAT CACCCAGAGC ACCAACGTTG TAGTGAAGGA GGTCACCATC CAAAATGCTG CGCAAGCACA TTTGGTGTTT GAGACCTGTT CACGAGTGCT CGTGAAAGAA GTGAAGGTGA TAGCTCCAGA AGATAGCCCC AACACAGATG GTATAAGCTT TGCCGATACT CAGAAGGCCA CTGTCGAGTA TTCAGAAGTT TCTACTGGTA CGTCCCGAGG TTTCCTTTGT TCTATCGTTT GCACTCCCCA CTTTCGTTTC TCGCAGCTTT GCGCAGTAGA AAGTCGAAGA GACAAATGTC GTGTCGTGTC AAGGCGTCTT GATTACTTCT TTGGTCACAT AGAGCTTTGA GGATTTTATT TTCTCGAACA GTAAAATGAA GGAACAGTAA GGTTGTTGCA TAAGTTCAGC TTGATGAATA ATCACTTTCT AGCTCTAGCT CAGATTTTGA ACTAACTTTT TAAACAACCT CATTTTCCCT CATCTTCGTT GCAGGCGATG ACTGTGTTAG TATCAAGTCT GGATCATTTG ATATCATCAT TCATCACTTC AAGTGCGGGC CTGGAGCTGG AATCAGGTGA TTAGATGCTG CATCTCTGCA TCGGGGCATT TGAAGTAAAA TAGAAATGTG TGTTCTTTTG CTTGATTGTT AGAATGTAAC AGCTTCGACT CGCCGTTTGT GCTCAACAAG AAGATCTCAT GTAGGATATG AAGAGCTTTC AAAATCGCTC CAGTGGGAAG TTGTGAGAAA TAAGAACGGG ATATCACTCA CTCGTTCTTC TCGCTGCAGC ATTGGAAGCC TAGGCGCGAA GGGAACAACT AGCTGCGTTT CCAATATCAA TGTGTACAAT GTAACTGTTG AAAATGCTTC CGGTGCTGTG CGCATGAAAA CTTGGCAGGT GAGGGAACTT TCACCTCTTA TTTTGCGTGA AGTGTGTATT TGCCAGATTT GTCTAACATG AGAAATTTGG GACTGCTTCT TAGAATCGAA ATCTGACGTT TGAACTGCTG CAATCCTGAT TTTAGGGAGG ATCTGGATAT GTCAGCAAAG TCTCCTTCGA AAACATTAGA GTCAGAAATG TGAGCCATCC TGTGGTCATC GACCAATACT ACTGCGATAC AGCGAAATGC AGGAATCATG CGACAAAAGC TGTAGCGATC TCGGATGTGA AATTCAGGAA CATCGTCGGA AGCTACGACC CATCGTACAA AGCTGTTTCC CTGGCTTGCA GTGAGAAAGT GCCATGTACC GGCATCAGTA TGGTAAATGT AAACCTGTGG CCCATTCATG GATCGAGAAC GAGCCCGACA TTTAAAGGCG GATCTTTCTG CCATAATGCA TATGGAAGTG TTGATGGCTA CTCATCCACA GTCGGCATTG AAGATTGTTT GTCAACCCCT AGTGATATTT GGTGGAAATC AGCTCTCACA GCAAACAGAT TACTTTGCCC ACGGTTTTAA TTTTTTTATG TGAATGAATC TCAATTTCAG CATGAAAGCT GCAAGTCGTT CCTAGTAAAC TCGCTATCAG GAAATCCCCA ATTTCCATCC TCCTCTGGAC AATACTTGAA TCGAACACGT CGACAACAAA ATCACCAGGA GGAAGAATGC TGGAACTTCT GTTCGGGGAG TGTATATAGG TGCATCATAG GAGTTAGTGG TTTATCAGAG ATTGTAGAGT TGGTTTGGCT ACTCAAGCTC GAACTCTTCT TTTTCCTCAA GAAATCAGTT TTGATGATTT GGAAGAAGAA GCAGTAGGAG CATGAGTACA ACTCCCGGTG GCATCAGTAG TGTAACTTCA AATCTAAAAA GAGTAGAGGG GTGGCATGTG CATTTAGCGG GTCTGGAGAT GTAGCGGATT GAGGTCGCCT CTCAGCTCTC TCAGATACAC TTTTGCAGTT AGAGCCCCAA CGTTAGCACG ATCTTCTTCA CCCATTGCTC TGAGGATGCA GTTGACCAAG TGAGTGCATC TGCTCTGTGT CTTCTGTCCA ACACAGGCCT TGTTCTGTTA ATAGAACTAG GGCGCCTGAG GGCTTTATAG AGGTATATTC AGGCATACAT TCACTAACTG CCACCTGCTG AGGAGCCTGG CAGGTTCTAG TGGTTGTAAT AAAGATCGAA AAAGGAAACT CTTGTCACAT GAAGTCTTGT CTCTT |
mRNA UTR + CDS |
| >Mp3g21140.1 TACTATCTGG ATCAGCATAA AAAACTCATC AAAACTTCGA ATATTTTTTC ACACGGACCT CAGTGGGCCA AAGCTCGAAG AAGATTCTAT TGCTAATCGT CGCCACGGAT CCTAGCTAGA AGATTGTCGT CGTAGTTCTC TATGAGGATG TACAACAAGT CATTTGGTAC AGCAAAGAGT TTCGTGGTGT TTCTGGTTCT CGTGGAGGGA TGGATCAGCG TTTCTATGAG CTTGGCGTTG CCTTCTCCGG AGAGACAACG TATGTCTCAA CACAATGCGA TCGTTCAAGA GTCAGACCGC AGAATGCTTT TGAATTCTTG GCCTCGATTA TGGGGCAATC AGTTCAACGT GCTGACTTAT GGAGCCAAAG GTGATGGCCA GACTTGTGAC ACTAAGGCCT TTGAATTAGC ATGGCTTGGT GCATGCACAT ATGCTGGTGG TGTGATGGTC GTTCCCGCAG GATACGTTTT TCTGGTCGGT CCCATCATGT TTAAGGGACC TTGCAGCACA AATACCCTTG TTCAGGTGGA TGGCACCATA TTAAGCATGC CCTCAAATTC AACTGAGTGG CTTGAGTCAA AAAAAATATG GTGGTTGAAG TTCGTGGGTT TGAATGGACT CACCATCATG GGATCAGGTT TAATCAACGG CAATGGAGCT TCTTGGTGGT GCAACTCCTG CAGAAGGGCG GAGGTTCTAC CCAAAAGATG CAGAGCGCCG ACTGCAGTAA AAATCACCCA GAGCACCAAC GTTGTAGTGA AGGAGGTCAC CATCCAAAAT GCTGCGCAAG CACATTTGGT GTTTGAGACC TGTTCACGAG TGCTCGTGAA AGAAGTGAAG GTGATAGCTC CAGAAGATAG CCCCAACACA GATGGTATAA GCTTTGCCGA TACTCAGAAG GCCACTGTCG AGTATTCAGA AGTTTCTACT GGCGATGACT GTGTTAGTAT CAAGTCTGGA TCATTTGATA TCATCATTCA TCACTTCAAG TGCGGGCCTG GAGCTGGAAT CAGCATTGGA AGCCTAGGCG CGAAGGGAAC AACTAGCTGC GTTTCCAATA TCAATGTGTA CAATGTAACT GTTGAAAATG CTTCCGGTGC TGTGCGCATG AAAACTTGGC AGGGAGGATC TGGATATGTC AGCAAAGTCT CCTTCGAAAA CATTAGAGTC AGAAATGTGA GCCATCCTGT GGTCATCGAC CAATACTACT GCGATACAGC GAAATGCAGG AATCATGCGA CAAAAGCTGT AGCGATCTCG GATGTGAAAT TCAGGAACAT CGTCGGAAGC TACGACCCAT CGTACAAAGC TGTTTCCCTG GCTTGCAGTG AGAAAGTGCC ATGTACCGGC ATCAGTATGG TAAATGTAAA CCTGTGGCCC ATTCATGGAT CGAGAACGAG CCCGACATTT AAAGGCGGAT CTTTCTGCCA TAATGCATAT GGAAGTGTTG ATGGCTACTC ATCCACAGTC GGCATTGAAG ATTGTTTGTC AACCCCTAGT GATATTTGGT GGAAATCAGC TCTCACAGCA AACAGATTAC TTTGCCCACG GTTTTAATTT TTTTATGTGA ATGAATCTCA ATTTCAGCAT GAAAGCTGCA AGTCGTTCCT AGTAAACTCG CTATCAGGAA ATCCCCAATT TCCATCCTCC TCTGGACAAT ACTTGAATCG AACACGTCGA CAACAAAATC ACCAGGAGGA AGAATGCTGG AACTTCTGTT CGGGGAGTGT ATATAGGTGC ATCATAGGAG TTAGTGGTTT ATCAGAGATT GTAGAGTTGG TTTGGCTACT CAAGCTCGAA CTCTTCTTTT TCCTCAAGAA ATCAGTTTTG ATGATTTGGA AGAAGAAGCA GTAGGAGCAT GAGTACAACT CCCGGTGGCA TCAGTAGTGT AACTTCAAAT CTAAAAAGAG TAGAGGGGTG GCATGTGCAT TTAGCGGGTC TGGAGATGTA GCGGATTGAG GTCGCCTCTC AGCTCTCTCA GATACACTTT TGCAGTTAGA GCCCCAACGT TAGCACGATC TTCTTCACCC ATTGCTCTGA GGATGCAGTT GACCAAGTGA GTGCATCTGC TCTGTGTCTT CTGTCCAACA CAGGCCTTGT TCTGTTAATA GAACTAGGGC GCCTGAGGGC TTTATAGAGG TATATTCAGG CATACATTCA CTAACTGCCA CCTGCTGAGG AGCCTGGCAG GTTCTAGTGG TTGTAATAAA GATCGAAAAA GGAAACTCTT GTCACATGAA GTCTTGTCTC TT |
CDS |
| >Mp3g21140.1 ATGAGGATGT ACAACAAGTC ATTTGGTACA GCAAAGAGTT TCGTGGTGTT TCTGGTTCTC GTGGAGGGAT GGATCAGCGT TTCTATGAGC TTGGCGTTGC CTTCTCCGGA GAGACAACGT ATGTCTCAAC ACAATGCGAT CGTTCAAGAG TCAGACCGCA GAATGCTTTT GAATTCTTGG CCTCGATTAT GGGGCAATCA GTTCAACGTG CTGACTTATG GAGCCAAAGG TGATGGCCAG ACTTGTGACA CTAAGGCCTT TGAATTAGCA TGGCTTGGTG CATGCACATA TGCTGGTGGT GTGATGGTCG TTCCCGCAGG ATACGTTTTT CTGGTCGGTC CCATCATGTT TAAGGGACCT TGCAGCACAA ATACCCTTGT TCAGGTGGAT GGCACCATAT TAAGCATGCC CTCAAATTCA ACTGAGTGGC TTGAGTCAAA AAAAATATGG TGGTTGAAGT TCGTGGGTTT GAATGGACTC ACCATCATGG GATCAGGTTT AATCAACGGC AATGGAGCTT CTTGGTGGTG CAACTCCTGC AGAAGGGCGG AGGTTCTACC CAAAAGATGC AGAGCGCCGA CTGCAGTAAA AATCACCCAG AGCACCAACG TTGTAGTGAA GGAGGTCACC ATCCAAAATG CTGCGCAAGC ACATTTGGTG TTTGAGACCT GTTCACGAGT GCTCGTGAAA GAAGTGAAGG TGATAGCTCC AGAAGATAGC CCCAACACAG ATGGTATAAG CTTTGCCGAT ACTCAGAAGG CCACTGTCGA GTATTCAGAA GTTTCTACTG GCGATGACTG TGTTAGTATC AAGTCTGGAT CATTTGATAT CATCATTCAT CACTTCAAGT GCGGGCCTGG AGCTGGAATC AGCATTGGAA GCCTAGGCGC GAAGGGAACA ACTAGCTGCG TTTCCAATAT CAATGTGTAC AATGTAACTG TTGAAAATGC TTCCGGTGCT GTGCGCATGA AAACTTGGCA GGGAGGATCT GGATATGTCA GCAAAGTCTC CTTCGAAAAC ATTAGAGTCA GAAATGTGAG CCATCCTGTG GTCATCGACC AATACTACTG CGATACAGCG AAATGCAGGA ATCATGCGAC AAAAGCTGTA GCGATCTCGG ATGTGAAATT CAGGAACATC GTCGGAAGCT ACGACCCATC GTACAAAGCT GTTTCCCTGG CTTGCAGTGA GAAAGTGCCA TGTACCGGCA TCAGTATGGT AAATGTAAAC CTGTGGCCCA TTCATGGATC GAGAACGAGC CCGACATTTA AAGGCGGATC TTTCTGCCAT AATGCATATG GAAGTGTTGA TGGCTACTCA TCCACAGTCG GCATTGAAGA TTGTTTGTCA ACCCCTAGTG ATATTTGGTG GAAATCAGCT CTCACAGCAA ACAGATTACT TTGCCCACGG TTTTAA |
Protein |
| >Mp3g21140.1 MRMYNKSFGT AKSFVVFLVL VEGWISVSMS LALPSPERQR MSQHNAIVQE SDRRMLLNSW PRLWGNQFNV LTYGAKGDGQ TCDTKAFELA WLGACTYAGG VMVVPAGYVF LVGPIMFKGP CSTNTLVQVD GTILSMPSNS TEWLESKKIW WLKFVGLNGL TIMGSGLING NGASWWCNSC RRAEVLPKRC RAPTAVKITQ STNVVVKEVT IQNAAQAHLV FETCSRVLVK EVKVIAPEDS PNTDGISFAD TQKATVEYSE VSTGDDCVSI KSGSFDIIIH HFKCGPGAGI SIGSLGAKGT TSCVSNINVY NVTVENASGA VRMKTWQGGS GYVSKVSFEN IRVRNVSHPV VIDQYYCDTA KCRNHATKAV AISDVKFRNI VGSYDPSYKA VSLACSEKVP CTGISMVNVN LWPIHGSRTS PTFKGGSFCH NAYGSVDGYS STVGIEDCLS TPSDIWWKSA LTANRLLCPR F |