Mp4g16280



Description

Annotation

Database ID Description
CDD cd09913 EHD
ProSiteProfiles PS50031 EH domain profile.
PANTHER PTHR11216 EH DOMAIN
FunFam G3DSA:3.40.50.300:FF:000147 EH domain-containing protein 1
Pfam PF18150 Domain of unknown function (DUF5600)
Gene3D G3DSA:3.40.50.300 -
CDD cd00052 EH
Pfam PF12763 Cytoskeletal-regulatory complex EF hand
ProSiteProfiles PS51718 Dynamin-type guanine nucleotide-binding (G) domain profile.
Pfam PF16880 N-terminal EH-domain containing protein
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Pfam PF00350 Dynamin family
SUPERFAMILY SSF47473 EF-hand
Gene3D G3DSA:1.10.238.10 -
Gene3D G3DSA:1.10.268.20 -
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
Coils Coil Coil
SMART SM00027 eh_3
KEGG K12483 EH domain-containing protein 1
KOG KOG1954 Endocytosis/signaling protein EHD1; C-term missing; [TU]
KOG KOG0998 Synaptic vesicle protein EHS-1 and related EH domain proteins; C-term missing; [TU]
MapolyID Mapoly0054s0094 -
GO GO:0005509 calcium ion binding
GO GO:0043231 intracellular membrane-bounded organelle
GO GO:0005525 GTP binding
GO GO:0005515 protein binding
GO GO:0006897 endocytosis
GO GO:0005886 plasma membrane
GO GO:0016197 endosomal transport
GO GO:0005737 cytoplasm

Nomenclature

Gene symbol Product Transcript ID Status
MpABCI3 ABC transporters Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g16280.1 chr4:21795028..21801587 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.