Mp4g21300
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR47997 | MYB DOMAIN PROTEIN 55 |
| SMART | SM00717 | sant |
| Gene3D | G3DSA:1.10.10.60 | - |
| CDD | cd00167 | SANT |
| ProSiteProfiles | PS51294 | Myb-type HTH DNA-binding domain profile. |
| ProSiteProfiles | PS50090 | Myb-like domain profile. |
| SUPERFAMILY | SSF46689 | Homeodomain-like |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF00249 | Myb-like DNA-binding domain |
| KOG | KOG0048 | Transcription factor, Myb superfamily; C-term missing; [K] |
| MapolyID | Mapoly0090s0091 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| Mp1R-MYB17 | transcription factor, MYB | Published |
Associated Literature (AI-based literature mining, Beta-version)
transcription factor, MYB (from nomenclature)
0 core 3 peripheral
Dong, Y., et al. (2024)
· Nature Plants research experimental comparator
Master TF with distinct targets.
Marron, A. O., et al. (2023)
· The Plant Journal research sequence subject
Candidate gene near the insertion site of the margin tissue marker line ET239-P64. Noted from RNAseq to be strongly up-regulated by auxin (2,4-D) treatment.
Sakai Y, Takami H, Yamaoka S, Kato H, Fukaki H, Kohchi T, Ishizaki K. (2025)
· The New phytologist research experimental background
Downregulated DEG in MpSTG-induction transcriptome analysis.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp4g21300 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g21300.1 AGAAAAAACT CGGGCGCCGC TGCTGCTCAT CCTCCAGCTT TTCTTTCTTT CGCTTTATTT GAAATCCCTA GGTTTTCTCC TTCCTCTTTC CTTGAGGGTT TACTCAAGTG CTTGCTGTTG CTGCCGCTGC TGTGTGAGCC GTGCCCCCTT CCCAACGGGT GAAGAAAAAA GGCAAGAGGA GGAGGGCCTG GATACTTGAG CCACTTTTTC TATTGCTTAA GTGTCTGCAG GCAGGAAAGG CTCTTATCCC CAGTCTTTTC CCATCTTTCC CTGTTAAACT CGTGACAGCA GTCTGTTAGA TGTACAGAGT GGAGCGAGCA AGGACCTGAA TTGCTGGCTG GCTGGCCTTC AACCTTTTCT CTTGCCTCTA CTCGTTTCTC CTCCTCGTGA GACCAGGCTC GTCGCCTCGT CTGCTTAATC TCCTCGTCTG CATCTTCCTA GTTCTTCTTC TTATCTTTTC ACGTTTCCAT CTCATTTACC ATCCGGACCA ACCAGTTGTT GAAAGTTGTT CTTCTATCAC TCCCTCCCTC CCGCCCACCA CCCCTCATCC TCCCTCCTTC CGCTAACCAG CCCGCCAGCC AACCTGCGCG TGTGTGTCGG GCGAAACCTG CCGATTCACG CAATCCATCC AGTGCAGTCG GAGCTTCACT TGGCCCTTTA AGAGAGCACA CAATCGTCTG AAGTACCTCA CAACATACCT ACTCGATTAT AAGAGAGGGA GCTGAGGGCC TTCAGAAGCA GACACATACA AGCAAACATC ACAGCAAGTA CTCCAGAGCG ACACAGAAAT CTCGACTTAC CGGTCGTGGA CAGTTTGACC TTCGGGATCC TCTGCTGAGT GGCATAGATT TTTTCTTTGC CCACGCACAA TCACAGAGAT GGGAAGCACG GGCCACATGA AGAAGAAGAA AAGACCATGG ACCCAGGACG AAGATGAACA ACTTTGCAGA TTTATGACCA ACAACGATCA GGCGCTCTGC TGGGAGGAAG TTCCCAAGCT TGCAGGTTTG TTTTTCTCAT CTATGTCATG TCGATCCTAG GTCGCCTGAA TTTTTCCTTC GTACAATCAA GGCCCACTCT GTACTTGTCT CCTTCTCTGC GACGGTTGAA TTGGTTTTTT TTCGGCGAGC GAGCCCTCTG CCGACGGCAC GCAAGGGCTC GTACAGATGG TCTACCGTGC TCCATGATGA CCGTCGCTTC ACGATATCAA TCGCTGCACG GTCCTTGCAG CGCAATTTAC CGGCCTTGCA ACAGGCGTTA CGACGTTTCT GTTACTGTCT GGATCCCCCG AAACGAACAT GTTCTCCCGA TCATGTTACC CATGCGATTT ACCCTCGTGC TTAGTGTGAA TCGCTCCCAA GTCTTTCTGC TGAAATTCTC TTGCCAGCTC CAGCAGTTTT ACCGTCCGTT CCTGACCGGC CTGCCAGATG AATTAGAGGG CATCGAGAGG CAGCCTGGAT TGAACAAGCT TTCGCCCAGA TTTTTTTGTG AGCATAGAAT GCTGCAGATA CGATGTGTCC CTTTCCCTTA GTAAACTGAA CATATGCTAC CCAGTTCAAG ACTAGCTCAG AACTCTGACT TGTACTTTTA GGGATATAAT GTGTTCTATT TAGAGGGTGA ACATGTCCCG TAGATCTCCA TTGGAGCCTG CTTGTTCCAT TATTGAGCTC TGCGCTGCGG CTTCCATCCC GAGGTGTTAA AGCTCTCTTG CTTGGGTTGC AACGGACGAG AAATCCAGTG AAATTCCGGG ATGTGCAGGA TTTTAGCCGC ACTACAGCAG ATTAATTAAA GATTGAGCTA TCATTGAATG GAATGCTTCC GCGAGGTTGG CCTGGCACTG TAGATGGGGA GTCGTCAGTT ATCGCTCAGA GAGCTGCTGT GACAAAAAAG ACAGTGCGTA GGTACACTCA CACGGGGGTG CTATTTTTTG TTCTGACTCG GGTCAGAAGA GCCACATTTC TAACACGGTG CTGGACTCTA GTTGGTGATG TGTACCGCTC CCGTTGCCTT TGCATGCTAT CACATGTGTA CGCTATATCT AAAGTAATTA GCCTCTGCAC CAACGGTAGC GAGTTGCAAT TCAGCTACCT CGTCAACTCT CTTGGGAATT GTCACAGGTT ATGACGGGCA GTTTTCAACG CATAAATTTT ACATGCTGAA ATTGGCGTGC CGGCTGCACA GAAAATCGTG CAACAATTAG TTTCCCCGTC GTGAAGTCGC ACGTGCGACA TCGACATCTC ACAATTTTTT TCGCTCTAAG TGGGGAATGC GCTCTCAGGA GTGTTATTGT CCTTATCTCT TCGAAAGGTC CCTCGGTTTC ATATGTGTCG AATAGCTTCA CTTCACAGGT GGAGACTGAA ATATGCACTG GAAAGACATC CTTCCGCTTT CTCCATCTCG ATTGTTCACA ATTCTAACTA ACGCTGCCTC ACGGCCCGAT TCAGGAGAAT ATTGCTCGCA TCCGTCGAGG GTCATGAAAG GCATGTAGAT GCCTAGAGCT TGTACCTGTA GCTTGGATCT TAGTCTTGGC AGTTGCTTCC TTCAGCAGTA GAGCACTGAC TGCTTCGCAA TGATTGACAA ATTCTAATCA TGTTCGAATC TGAAATTGTA TCTGATACAG CACAAATTCG CATTCTTGAT ACGTATCTTG ACGGGGAGCT TATTTGTTGA ATGCGCAGGA CTCTTAAGAA GTGGTAAAAG CTGTCGAACG CGTTGGAACT ATTTACGGCC ACGAGCTCGA GAGTTTATGG GCCTGGAGCT CTTCGGTCAG TGGGGCGAAA TGTCGGACGA AGTCGATCAA CCGATGTCTG ATGAATCAGA TGAGACGAAA TCCTACTACG ACGATGACGA ACAATCAGCC GAGAGCTGAC TGTCAGCTAG ATGTGGGAGT TGAAACCTCT GACCGTTCGA ATTGAATGCA TCTATAAGAC ATGTACACCA CATTTCCCTC AGCGCGGGGA GAAGTAGAAC CTTGAGGTCC AGAGAAAATG CTGACCAAAC AGTCCAATCA GCTGGTGCGG GCCCATTAGT CATACTTAGG AAGTAGAAAC TATACTGTTT TGTCAAGGGT AGCGGCAAAG ATGAAGATCT TGCTGCGTTT AGTACAGATA GGTAGATAAA TCCAAGGGGC TCGGGCTGTA AGTTCTCTCG TCTCTACAGT TCACACTATT TTTGCTCTCA TATGAAAAGC TTCATATGGG CGAGAGTTCA ACTTTCTTCC TTGGATTACT AGCCTAGCAT AATAGCTTTA GTTATCAGAT AGAAAGCACC TCCTCAGCTC ATTGTTACAC TGTATGTAAT TGCGGCGGAG TAAACAGCGC T |
mRNA UTR + CDS |
| >Mp4g21300.1 AGAAAAAACT CGGGCGCCGC TGCTGCTCAT CCTCCAGCTT TTCTTTCTTT CGCTTTATTT GAAATCCCTA GGTTTTCTCC TTCCTCTTTC CTTGAGGGTT TACTCAAGTG CTTGCTGTTG CTGCCGCTGC TGTGTGAGCC GTGCCCCCTT CCCAACGGGT GAAGAAAAAA GGCAAGAGGA GGAGGGCCTG GATACTTGAG CCACTTTTTC TATTGCTTAA GTGTCTGCAG GCAGGAAAGG CTCTTATCCC CAGTCTTTTC CCATCTTTCC CTGTTAAACT CGTGACAGCA GTCTGTTAGA TGTACAGAGT GGAGCGAGCA AGGACCTGAA TTGCTGGCTG GCTGGCCTTC AACCTTTTCT CTTGCCTCTA CTCGTTTCTC CTCCTCGTGA GACCAGGCTC GTCGCCTCGT CTGCTTAATC TCCTCGTCTG CATCTTCCTA GTTCTTCTTC TTATCTTTTC ACGTTTCCAT CTCATTTACC ATCCGGACCA ACCAGTTGTT GAAAGTTGTT CTTCTATCAC TCCCTCCCTC CCGCCCACCA CCCCTCATCC TCCCTCCTTC CGCTAACCAG CCCGCCAGCC AACCTGCGCG TGTGTGTCGG GCGAAACCTG CCGATTCACG CAATCCATCC AGTGCAGTCG GAGCTTCACT TGGCCCTTTA AGAGAGCACA CAATCGTCTG AAGTACCTCA CAACATACCT ACTCGATTAT AAGAGAGGGA GCTGAGGGCC TTCAGAAGCA GACACATACA AGCAAACATC ACAGCAAGTA CTCCAGAGCG ACACAGAAAT CTCGACTTAC CGGTCGTGGA CAGTTTGACC TTCGGGATCC TCTGCTGAGT GGCATAGATT TTTTCTTTGC CCACGCACAA TCACAGAGAT GGGAAGCACG GGCCACATGA AGAAGAAGAA AAGACCATGG ACCCAGGACG AAGATGAACA ACTTTGCAGA TTTATGACCA ACAACGATCA GGCGCTCTGC TGGGAGGAAG TTCCCAAGCT TGCAGGACTC TTAAGAAGTG GTAAAAGCTG TCGAACGCGT TGGAACTATT TACGGCCACG AGCTCGAGAG TTTATGGGCC TGGAGCTCTT CGGTCAGTGG GGCGAAATGT CGGACGAAGT CGATCAACCG ATGTCTGATG AATCAGATGA GACGAAATCC TACTACGACG ATGACGAACA ATCAGCCGAG AGCTGACTGT CAGCTAGATG TGGGAGTTGA AACCTCTGAC CGTTCGAATT GAATGCATCT ATAAGACATG TACACCACAT TTCCCTCAGC GCGGGGAGAA GTAGAACCTT GAGGTCCAGA GAAAATGCTG ACCAAACAGT CCAATCAGCT GGTGCGGGCC CATTAGTCAT ACTTAGGAAG TAGAAACTAT ACTGTTTTGT CAAGGGTAGC GGCAAAGATG AAGATCTTGC TGCGTTTAGT ACAGATAGGT AGATAAATCC AAGGGGCTCG GGCTGTAAGT TCTCTCGTCT CTACAGTTCA CACTATTTTT GCTCTCATAT GAAAAGCTTC ATATGGGCGA GAGTTCAACT TTCTTCCTTG GATTACTAGC CTAGCATAAT AGCTTTAGTT ATCAGATAGA AAGCACCTCC TCAGCTCATT GTTACACTGT ATGTAATTGC GGCGGAGTAA ACAGCGCT |
CDS |
| >Mp4g21300.1 ATGGGAAGCA CGGGCCACAT GAAGAAGAAG AAAAGACCAT GGACCCAGGA CGAAGATGAA CAACTTTGCA GATTTATGAC CAACAACGAT CAGGCGCTCT GCTGGGAGGA AGTTCCCAAG CTTGCAGGAC TCTTAAGAAG TGGTAAAAGC TGTCGAACGC GTTGGAACTA TTTACGGCCA CGAGCTCGAG AGTTTATGGG CCTGGAGCTC TTCGGTCAGT GGGGCGAAAT GTCGGACGAA GTCGATCAAC CGATGTCTGA TGAATCAGAT GAGACGAAAT CCTACTACGA CGATGACGAA CAATCAGCCG AGAGCTGA |
Protein |
| >Mp4g21300.1 MGSTGHMKKK KRPWTQDEDE QLCRFMTNND QALCWEEVPK LAGLLRSGKS CRTRWNYLRP RAREFMGLEL FGQWGEMSDE VDQPMSDESD ETKSYYDDDE QSAES |