Marron, A. O., et al. · 2023 · The Plant Journal research
doi:10.1111/tpj.16394 PMID:37583263 PMC10952768
| Gene ID | Name | Evidence / Role | Function (this paper) |
|---|---|---|---|
| Mp4g21300 | Mp1R-MYB17 | sequence subject | Candidate gene near the insertion site of the margin tissue marker line ET239-P64. Noted from RNAseq to be strongly up-regulated by auxin (2,4-D) treatment. |
| Mp4g00190 | Mp4g00190 missing | sequence subject | Candidate gene near the ET239-P54 insertion site, encoding a small protein of unknown function with no known homology to other plant genes. |
| Mp4g04240 | Mp4g04240 missing | sequence subject | Candidate gene near the insertion site of the apical notch marker line ET239-P161. BLAST shows similarity to an embryophyte-specific gene family found across all land plants. |
| Mp4g21310 | Mp4g21310 missing | sequence subject | Candidate gene near the ET239-P64 margin marker insertion site, encoding a protein of unknown function, identified by genomic analysis. |
| Mp4g21320 | Mp4g21320 missing | sequence subject | Candidate gene near the ET239-P64 margin marker insertion site, annotated as a cyclophilin-type peptidyl-prolyl isomerase, identified by genomic analysis. |
| Mp3g17930 | MpRSL1 | sequence subject | Identified by genomic analysis as the candidate gene near the insertion site of the rhizoid marker line ET239-P177. Annotated as the Marchantia homolog of Root Hairless-like 6 (RSL6), a transcription factor implicated in rhizoid/root-hair development. |
| Mp4g00200 | MpWRKY12 | sequence subject | Candidate gene near the insertion site of the oil cell marker line ET239-P54, found enriched in the oil cell cluster. A WRKY-family transcription factor consistent with oil cells' role in anti-herbivore defense. |
| Mp4g00180 | MpWRKY13 | sequence subject | WRKY-family candidate gene located near the ET239-P54 oil cell marker insertion site, identified via genomic analysis of the trapped region. |
| Mp3g21660 | MpPIN1 | experimental tool | Used as a marker line to visualize polar auxin transport; elevated auxin treatment increased the spatial distribution of MpPIN1 expression as predicted. |
| Mp8g08780 | MpYUC2 | experimental tool | Used as a validation marker line; auxin and inhibitor treatments confirmed the expected response, demonstrating treatments did not non-specifically alter enhancer trap signals. |
| Mp5g06970 | MpERF20 | citation background | Cited from prior work: over-expression of MpLAXR (MpERF20) caused strong cell division at gemma edges, discussed as context for margin tissue regulation. |