Mp4g21720



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
Pfam PF00855 PWWP domain
Pfam PF13831 PHD-finger
ProSitePatterns PS01359 Zinc finger PHD-type signature.
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
SMART SM00249 PHD_3
CDD cd20143 PWWP_AtATX3-like
Gene3D G3DSA:2.170.270.10 SET domain
SUPERFAMILY SSF82199 SET domain
CDD cd10518 SET_SETD1-like
PANTHER PTHR13793 PHD FINGER PROTEINS
Pfam PF00856 SET domain
ProSiteProfiles PS51805 Extended PHD (ePHD) domain profile.
SUPERFAMILY SSF63748 Tudor/PWWP/MBT
SMART SM00317 set_7
Pfam PF00628 PHD-finger
Gene3D G3DSA:2.30.30.140 -
SMART SM00293 PWWP_4
CDD cd15495 PHD_ATX3_4_5_like
ProSiteProfiles PS50868 Post-SET domain profile.
ProSiteProfiles PS50812 PWWP domain profile.
ProSiteProfiles PS50280 SET domain profile.
Pfam PF13832 PHD-zinc-finger like domain
KOG KOG1080 Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases; [BK]
MapolyID Mapoly0090s0049 -
GO GO:0005515 protein binding
GO GO:0006357 regulation of transcription by RNA polymerase II

Nomenclature

Gene symbol Product Transcript ID Status
MpATX2 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g21720.1 chr4:28893083..28911746 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.