Database | ID | Description |
---|---|---|
SUPERFAMILY | SSF51182 | RmlC-like cupins |
PRINTS | PR00325 | Germin signature |
Gene3D | G3DSA:2.60.120.10 | Jelly Rolls |
CDD | cd02241 | cupin_OxOx |
PANTHER | PTHR31238 | GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 |
SMART | SM00835 | Cupin_1_3 |
Pfam | PF00190 | Cupin |
MapolyID | Mapoly0193s0008 | - |
GO | GO:0030145 | manganese ion binding |
GO | GO:0005618 | cell wall |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpCupin66 | Cupin | Provisional |
Sequences: |
Gene UTR + CDS + intron |
>Mp5g00890.1 TCTGCCTCCA TAACTCAGCC AAGTGAATAA GTAACCTGCT CTAGTATCGG GAGAGGCGTG GTACCCTGAA ATGTAAGTTC CTCCCCAAAT GTCGAATCAT TGATGCATCT TTGTTGCACT GAACACGAGC ATCTGCATAC TTTTGTGAGA ACTTCTTTAC ACTCAGCTAG TAATTCTACA TGTCTTCCGT TTGGAAATCT ATGAGTTGTG ATCCTGGTTT CAGATCGATC AGCTCAGATA TTCGATTTCA CGAAATATGT TCGAAGAATT GATAGGGGAG ATCATTCATT ATCGTTAAGT TCACTCCGGA CATGTTGGAT TGCAGATCTA CAGCTTAAAA TCGGTAAGGA ATCATGGCCA CAATGAAGCT GGTAGTTGTC CTTATGATGA CAACCGTCAT TGCCGTCTGG GCCCGTGACC CCGAGCTCAC AACCGACTTC GCCGTCCCAG TAGGAATGAA CGCTTCCATG ATCACTGGAG ATTTCTTCAC ATTCACAGGC CTCAGAGACT TCTCCGCTGC TCCAAACACC TTCGGCTCCA AGAAGGTTAC CCATGTCGAA TTCCCCGCTC TCACTGGACT CGGCGTCGGT GTCACTCTCC TCGAGTACAA GCCCAAAACT CTGAACCCAC CCCACACTCA CCCCCGTGGA TCAGAGCTCA TCTACGTCTT GTCCGGACAC TTGGACGTCG GCCTCATCGA CTCTGCCAAC AAGCTGTACT CTGCCCATCT CCATGAGGGT GACTTGTTCG TGTTCCCTCA GGGTCTTGTA CACTTCCAGA TCAACATGTC CAAGAAGAAG AGTGTTCGCG CCCTCTCTGC TTTCGGTAGC TCTAACGCCG GCACCATCTC GTTGCCCAGG AACATCTTCG GTTCTGGAAT TGAGAACGAG GTTCTCCTCA AGGCTTTCAA GATCACTTCC GCGGAGTTGA TGAAACTGAA AGCTCCATTC ATGCCGACCA TGTAGAATTT GCAGCGGAAA TAACTGATGT CTCCGGGAGG ATTTAGTGCG TTTTGCATGC TCAATACTTT CGTATACTGT GTCCATCAGC TTGATGGGGA TCACTCTAGG ACATGTTTTA TGAAGATTTT TAGCGTCTCA CCAGAAAAGG TTTGCTCCCC GTGAGGGATC TCAAGTGAAT GTTTTTGGGG AAAACGCTAC CAGGTAGTTT AAATGTTCCA TTTACCTCTC TCAAATATAC GGACAGTCTG AAGTCCAG |
mRNA UTR + CDS |
>Mp5g00890.1 TCTGCCTCCA TAACTCAGCC AAGTGAATAA GTAACCTGCT CTAGTATCGG GAGAGGCGTG GTACCCTGAA ATATCTACAG CTTAAAATCG GTAAGGAATC ATGGCCACAA TGAAGCTGGT AGTTGTCCTT ATGATGACAA CCGTCATTGC CGTCTGGGCC CGTGACCCCG AGCTCACAAC CGACTTCGCC GTCCCAGTAG GAATGAACGC TTCCATGATC ACTGGAGATT TCTTCACATT CACAGGCCTC AGAGACTTCT CCGCTGCTCC AAACACCTTC GGCTCCAAGA AGGTTACCCA TGTCGAATTC CCCGCTCTCA CTGGACTCGG CGTCGGTGTC ACTCTCCTCG AGTACAAGCC CAAAACTCTG AACCCACCCC ACACTCACCC CCGTGGATCA GAGCTCATCT ACGTCTTGTC CGGACACTTG GACGTCGGCC TCATCGACTC TGCCAACAAG CTGTACTCTG CCCATCTCCA TGAGGGTGAC TTGTTCGTGT TCCCTCAGGG TCTTGTACAC TTCCAGATCA ACATGTCCAA GAAGAAGAGT GTTCGCGCCC TCTCTGCTTT CGGTAGCTCT AACGCCGGCA CCATCTCGTT GCCCAGGAAC ATCTTCGGTT CTGGAATTGA GAACGAGGTT CTCCTCAAGG CTTTCAAGAT CACTTCCGCG GAGTTGATGA AACTGAAAGC TCCATTCATG CCGACCATGT AGAATTTGCA GCGGAAATAA CTGATGTCTC CGGGAGGATT TAGTGCGTTT TGCATGCTCA ATACTTTCGT ATACTGTGTC CATCAGCTTG ATGGGGATCA CTCTAGGACA TGTTTTATGA AGATTTTTAG CGTCTCACCA GAAAAGGTTT GCTCCCCGTG AGGGATCTCA AGTGAATGTT TTTGGGGAAA ACGCTACCAG GTAGTTTAAA TGTTCCATTT ACCTCTCTCA AATATACGGA CAGTCTGAAG TCCAG |
CDS |
>Mp5g00890.1 ATGGCCACAA TGAAGCTGGT AGTTGTCCTT ATGATGACAA CCGTCATTGC CGTCTGGGCC CGTGACCCCG AGCTCACAAC CGACTTCGCC GTCCCAGTAG GAATGAACGC TTCCATGATC ACTGGAGATT TCTTCACATT CACAGGCCTC AGAGACTTCT CCGCTGCTCC AAACACCTTC GGCTCCAAGA AGGTTACCCA TGTCGAATTC CCCGCTCTCA CTGGACTCGG CGTCGGTGTC ACTCTCCTCG AGTACAAGCC CAAAACTCTG AACCCACCCC ACACTCACCC CCGTGGATCA GAGCTCATCT ACGTCTTGTC CGGACACTTG GACGTCGGCC TCATCGACTC TGCCAACAAG CTGTACTCTG CCCATCTCCA TGAGGGTGAC TTGTTCGTGT TCCCTCAGGG TCTTGTACAC TTCCAGATCA ACATGTCCAA GAAGAAGAGT GTTCGCGCCC TCTCTGCTTT CGGTAGCTCT AACGCCGGCA CCATCTCGTT GCCCAGGAAC ATCTTCGGTT CTGGAATTGA GAACGAGGTT CTCCTCAAGG CTTTCAAGAT CACTTCCGCG GAGTTGATGA AACTGAAAGC TCCATTCATG CCGACCATGT AG |
Protein |
>Mp5g00890.1 MATMKLVVVL MMTTVIAVWA RDPELTTDFA VPVGMNASMI TGDFFTFTGL RDFSAAPNTF GSKKVTHVEF PALTGLGVGV TLLEYKPKTL NPPHTHPRGS ELIYVLSGHL DVGLIDSANK LYSAHLHEGD LFVFPQGLVH FQINMSKKKS VRALSAFGSS NAGTISLPRN IFGSGIENEV LLKAFKITSA ELMKLKAPFM PTM |