Mp5g04500



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
PANTHER PTHR43671 SERINE/THREONINE-PROTEIN KINASE NEK
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
FunFam G3DSA:3.30.200.20:FF:000108 Serine/threonine-protein kinase Nek2
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
SMART SM00220 serkin_6
ProSiteProfiles PS50011 Protein kinase domain profile.
Pfam PF00069 Protein kinase domain
CDD cd08215 STKc_Nek
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
KEGG K08857 serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
KOG KOG0589 Serine/threonine protein kinase; C-term missing; [R]
KOG KOG4796 RNA polymerase II elongation factor; N-term missing; [K]
MapolyID Mapoly0027s0176 -
GO GO:0006468 protein phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0004674 protein serine/threonine kinase activity
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
MpNEK NEK Published
Directs tip growth in rhizoids through microtubule organization

Associated Literature (AI-based literature mining, Beta-version)

NIMA-RELATED kinase that destabilizes microtubules at growing tips; loss-of-function mutants produce wavy rhizoids.

1 core 0 peripheral

Champion, C., et al. (2021) · PLoS Genetics  research experimental subject
NIMA-RELATED kinase that destabilizes microtubules at growing tips; loss-of-function mutants produce wavy rhizoids.

Transcript models

Transcript ID Location Sequences Extract region
Mp5g04500.1 chr5:6569057..6576087 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g04500 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g04500 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.