Mp5g04800



Description

Annotation

Database ID Description
Pfam PF04825 N terminus of Rad21 / Rec8 like protein
SUPERFAMILY SSF46785 "Winged helix" DNA-binding domain
PANTHER PTHR12585 SCC1 / RAD21 FAMILY MEMBER
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF04824 Conserved region of Rad21 / Rec8 like protein
Gene3D G3DSA:1.10.10.580 Structural maintenance of chromosome 1. Chain E
FunFam G3DSA:1.10.10.580:FF:000002 Sister chromatid cohesion 1 protein 4
CDD cd21793 Rad21_Rec8_M_AtSYN1-like
Coils Coil Coil
KEGG K06670 cohesin complex subunit SCC1
KOG KOG1213 Sister chromatid cohesion complex Cohesin, subunit RAD21/SCC1; C-term missing; [D]
KOG KOG1213 Sister chromatid cohesion complex Cohesin, subunit RAD21/SCC1; N-term missing; [D]
KOG KOG0943 Predicted ubiquitin-protein ligase/hyperplastic discs protein, HECT superfamily; N-term missing; C-term missing; [O]
MapolyID Mapoly0027s0147 -
GO GO:1990414 replication-born double-strand break repair via sister chromatid exchange
GO GO:0008278 cohesin complex
GO GO:0005515 protein binding
GO GO:0003682 chromatin binding
GO GO:0007062 sister chromatid cohesion

Nomenclature

Gene symbol Product Transcript ID Status
MpRAD21 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g04800.1 chr5:6892342..6902987 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.