Mp5g08180



Description

Annotation

Database ID Description
SMART SM00028 tpr_5
Gene3D G3DSA:2.170.270.10 SET domain
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
SUPERFAMILY SSF82199 SET domain
SUPERFAMILY SSF48452 TPR-like
ProSiteProfiles PS50280 SET domain profile.
PANTHER PTHR47337 TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN
Pfam PF13181 Tetratricopeptide repeat
KEGG K24634 SET and MYND domain-containing protein 4 [EC:2.1.1.-]
KOG KOG0550 Molecular chaperone (DnaJ superfamily); N-term missing; C-term missing; [O]
KOG KOG2084 Predicted histone tail methylase containing SET domain; N-term missing; C-term missing; [B]
MapolyID Mapoly0086s0022 -
GO GO:0005515 protein binding

Nomenclature

Gene symbol Product Transcript ID Status
MpATXR4 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g08180.1 chr5:11206711..11213640 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g08180.2 chr5:11206711..11213640 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g08180.3 chr5:11206799..11213628 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.