Mp5g09130



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd00202 ZnF_GATA
ProSitePatterns PS00344 GATA-type zinc finger domain.
Gene3D G3DSA:3.30.50.10 -
ProSiteProfiles PS51916 DEUBAD (DEUBiquitinase ADaptor) domain profile.
PANTHER PTHR46855 OSJNBB0038F03.10 PROTEIN
Pfam PF13919 Asx homology domain
SMART SM00401 GATA_3
ProSiteProfiles PS50114 GATA-type zinc finger domain profile.
Pfam PF00320 GATA zinc finger
SUPERFAMILY SSF57716 Glucocorticoid receptor-like (DNA-binding domain)
KOG KOG1601 GATA-4/5/6 transcription factors; N-term missing; [K]
MapolyID Mapoly0095s0046 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0043565 sequence-specific DNA binding
GO GO:0008270 zinc ion binding

Nomenclature

Gene symbol Product Transcript ID Status
MpGATA5 transcription factor, GATA Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g09130.1 chr5:12256021..12264123 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g09130.2 chr5:12256021..12264120 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.